Gene Slin_6381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6381 
Symbol 
ID8730165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7735306 
End bp7736589 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content55% 
IMG OID 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_003391138 
Protein GI284041208 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACG AAACCTTACA TCATTGCCGT CAGGAGTTAC ACCATCACCT GACCACCGAG 
TTGCTGCCCT TCTGGACGGC CCGCACCGCC GATCATGTAC ACGGGGGCTT CATTACCCAT
TTCGACGAGC ATGGCCACGA CTCGGGCGAA GACGAAAAAT CGCTCATTGC CCAGACCCGA
TCTATCTATA CGTATGCATC GGCCCACCGG GCGGGCTACG GATCGGGTGA GTTGGCCGAC
TTGGCGCGGC ATGGCGTCGA CTATTTGCTG AACCGCATGT GGGACCACGA ACACGGCGGT
TTTTACTGGA TGACCAACCG CCAAGGCGAG GTAACGAACG ACCAGAAAAT TGTGTACGGC
CAAAGTTTCG CCATCTATTG CCTGAGTGAG TATACCCTCG CTACCGGCGA CCAACGGGGC
GTTGAGTATG CCCAGAAAGT CTTTGATTTA CTCCAGAAAT ACGGAGCCGA TACCTGCTAT
GGCGGGTACT TCGAAATGTT TGACCGCGAC TGGACCCTGA AAGGACCCGG TGCTGCCGGG
GGGAACCGTA AGACCCTCGA TGCTCACATG CACCTTATGG AGGCCTTTAC TACTTTGTAC
GAATGTACGC GCCAGCCCAT CCACCGCCGG AAGCTCCTGG AAGTGATCAG CCTGTTGGTT
GGTAAAGTGA TGCATCCCGT ATATGGTACG GGCGTACCGC AGTTCTGGGC CGATTGGCGG
GTGGCCCCGC AGATAAAATT CGACGTGATT TGGGGATGGG ACCGCTTTAC GGAAGACGGT
GCAAAAGAAG CCGCCGAAGA TAACACCAGC TACGGCCATA ATGCCGAGTT TGCCTGGTTG
CTGCTCCATG CACTTTCGAT ACTGGAGATT CCGCACGAAA CGTATTTTAG TCAGTTGCAG
AAAGCGTTTT CCCACGCAGC CGACAACGGT GTCGACTGGG AATTTGGGGG CGTTTTTGTC
GAGGGCTCGC ACAGTGGGAA GGTCTACGAC CGGGAAAAGG AGTTCTGGCA GCAGGCCGAA
GTACTTATTG GTTTTCTGGA TGCCTATCGA ATCTTCGGGG AGGAAAAATA CTGGCGGGCG
TATGAGAACG TTCACCGGTT TGTGATGGAC AAAATGGTGA ATCGTCCAGT AGGGGAGTGG
TGGCCGCTCA TGACGCGAAA AGGGGTGCCC ATCTGGACAC ACATGAGCCA TTCCTGGAAG
ATAAACTACC ACACCGTCCG GTCGATGGTG CAGTCGATCC GGCGGTTGGA TATGCTGTTG
GAGAAGGACA CCGTTCGTGA CTGA
 
Protein sequence
MTNETLHHCR QELHHHLTTE LLPFWTARTA DHVHGGFITH FDEHGHDSGE DEKSLIAQTR 
SIYTYASAHR AGYGSGELAD LARHGVDYLL NRMWDHEHGG FYWMTNRQGE VTNDQKIVYG
QSFAIYCLSE YTLATGDQRG VEYAQKVFDL LQKYGADTCY GGYFEMFDRD WTLKGPGAAG
GNRKTLDAHM HLMEAFTTLY ECTRQPIHRR KLLEVISLLV GKVMHPVYGT GVPQFWADWR
VAPQIKFDVI WGWDRFTEDG AKEAAEDNTS YGHNAEFAWL LLHALSILEI PHETYFSQLQ
KAFSHAADNG VDWEFGGVFV EGSHSGKVYD REKEFWQQAE VLIGFLDAYR IFGEEKYWRA
YENVHRFVMD KMVNRPVGEW WPLMTRKGVP IWTHMSHSWK INYHTVRSMV QSIRRLDMLL
EKDTVRD