Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6340 |
Symbol | |
ID | 8730124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7691475 |
End bp | 7692737 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | SMC domain protein |
Protein accession | YP_003391098 |
Protein GI | 284041168 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.815029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACTG AAAACCCCCG CGTCTGGTTC AAGAGTATCT CACTCGAAAA CGTCCGTTCC TTCGGCACAA AGCAGACGAT CAACTTCACC GACAAAGACG GCAATGCCGC CCGCTGGAAT GTGATTTTAG GCGACAATGG AACGGGAAAG ACGACGGTGT TGAAGTGTAT CTATATTTCG GCACAGAATT CTTACAGTTT TTATGAGTAT GAGTGGAGTT ATAAAGGCTT AGCTCGAATT AATAGTAAAG GGCCGAATGT AATGGGTTTA GTGACAGGGG TATTAGGGAT AAATGATAAT GAGGAGAAAG TAGGGTTTAG TACGAAATAT GTGCCTTTAG AGTCTGGTAG ATTTAGTGTT GATATTTTAG ATGAGTTTAA TTTTACACTA CCTGAAAGAA ATAATTTTGA GGTAATATAT GCTTATGGTG CAGCACGACG GATCAGTGCA GGAATATTAA ATAACTATGC GGAAGATGAA AGACGAGTTG TGAATTTGTT TTCGGAAAAT AGCGCACTAC TAAATGCTGA GAAGTGGCTT ATTCAAGCAG AGTATATTTC TTTAAAAGAA CCAAAATTTG CTACTCAATT TCTTATAGTT CTAAATATAT TAAAGAAGCT ATTTAGAGGT GAAGTATCTG ATATATTTAT TAAAACTGAA ACCGGAGAGC CCAGAGTCTT CTTTAAAACT CACTACGGCG ACGTTCGCCT TCACGAATTA AGCCTCGGCT ACAAAACCCT AATTGCGTGG ATGGTTGATT TTGCCAAAGG TTTGCTTGAT CGCTATCCAG ATAGTGAAAA TCCCTTAGCC GAACCTGCCG TTTGTTTAGT GGATGAAATA GATTTACACC TTCACCCAAA ATTTCAACGA ACGATTATTC AGTTCCTAAC CGAAACGTTT CCAAATACAC AGTTCATCGT TACGGCGCAT AGTCCGTTGA TTGTTCAGTC GGCAGAGGAT GCAAACATTA TTTTGCTGAA GCGTGAGGGC AGTGAAACGG TGGTTGCTGA TAGTATAGAC GTGCATAGCT GGCGTGTTGA CCAGATTCTG AGTAGCGATT TGTTTGGTGG CATAAGCCCC AGACCGCCAC AGGCAGAAGA TAGAATGCAA CGCCGACGTG CGTTGTTATT GAAAGATAGC CGAACCGAAA AGGAAGATAA AGAACTGGAG CAACTGGATG AAGAACTGGG TCAGCTTAAG GCTTCAGAGT CGGAAGAAGC GTTAAAAGCA CTTGAACTAA TTGGGAAAGT TTTGAGCAAA TAA
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Protein sequence | MATENPRVWF KSISLENVRS FGTKQTINFT DKDGNAARWN VILGDNGTGK TTVLKCIYIS AQNSYSFYEY EWSYKGLARI NSKGPNVMGL VTGVLGINDN EEKVGFSTKY VPLESGRFSV DILDEFNFTL PERNNFEVIY AYGAARRISA GILNNYAEDE RRVVNLFSEN SALLNAEKWL IQAEYISLKE PKFATQFLIV LNILKKLFRG EVSDIFIKTE TGEPRVFFKT HYGDVRLHEL SLGYKTLIAW MVDFAKGLLD RYPDSENPLA EPAVCLVDEI DLHLHPKFQR TIIQFLTETF PNTQFIVTAH SPLIVQSAED ANIILLKREG SETVVADSID VHSWRVDQIL SSDLFGGISP RPPQAEDRMQ RRRALLLKDS RTEKEDKELE QLDEELGQLK ASESEEALKA LELIGKVLSK
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