Gene Slin_6303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6303 
Symbol 
ID8730087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7652079 
End bp7653248 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content54% 
IMG OID 
Productacyltransferase 3 
Protein accessionYP_003391061 
Protein GI284041131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.557281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGAA AATCTATCCG TATAATTTCA CCAATATCGA GTGTTTATCT GGATGCCGCC 
CGCCTGATTG CCGCCCTCGT TGTCCTGTAT GTACACGCAC ACGACCAGTG GTACGGCGTT
GAAACAGCCC TGCTCAAATC GTTAGCGCAC GGGGCCGTCG TTATCTTCTT CGTTCTGTCG
GGTTACGTTA TCGCTTACAC GACGACCAAC AACAACCGGG GCGAATTTCA GTATGCCAAG
GCGCGGCTGA GTCGACTCTA TTCGGTGCTG TTTCCTACCC TGTTGATCAC CATCGTCGCC
AGTATCATCG TTTCGAAGGT CGACCCGGCG CTGATGGCCG AATATACGCG GGGAGCAGCC
TGGCCACGGT ATCTGCTCAG CGCCACCTTT CTGAACGAAA TCTGGTTTCT GTCGGCTACC
CCGCCCATCA ACCGGCCACT GTGGTCGCTG AGTTACGAGT TCTGGTATTA TGCCATTTTT
GGCGCCTGGT TTTTTGCTAA GGGGGGGTAC AAATCCTATC TGCCGTTCCT GCTGATTTGC
ATGGTGGCCG GTCCCAAAAT TCTGTGTATG ATGCCCATTT GGCTGGCTGG TGTTGCGGCT
TACAAATACC GGGGGCCTGT CAGTTCATCT AACAAGGTAT TCGTACTGAT CATTCTGCTG
TTTTGCGTTG TAGTGGTGTC TGTACTCTCG TTACCCGCTA TCCCGTACCA GCTTGGCAGA
AGTCCGCTTT ATTACGCCAA CCAGTTCATT ACCGACTGGA TTTCGGGGTT GATTTTCGCT
TTCTCCCTCT GGCTTTTACC AACCGTTGCC CAGGCGCCCG CCCGGCCCAA TCGCTGGATC
GAGCGGTTCA GGGATGTAGC CAACATGACG TTTCCGCTGT ATGTGCTGCA CCATCCGTTG
CTCATTCTGT GGCGTGCCGT TAGGGGTTAC CAGCAAGGCA GCCCGGCCGA TATGTGGCAG
GCCATTGCCG TTGTCACGCT TGTTTCGGCG GTGCTGGGTG TGCTGATGGA TAAGCAGCGG
TTCCTGTGGG ATCGATTCTT TACGTTCCTG CTGACCAACC TAAAACACCT GACGCAGATG
ATTCCGTCAT CTGCCCATCG GGCTAAAGTG CTTGTCTTTA ACACAGCCGG AAAATCGACC
GTCAGCGCGC GGTCTGAACA CGATAACTGA
 
Protein sequence
MPGKSIRIIS PISSVYLDAA RLIAALVVLY VHAHDQWYGV ETALLKSLAH GAVVIFFVLS 
GYVIAYTTTN NNRGEFQYAK ARLSRLYSVL FPTLLITIVA SIIVSKVDPA LMAEYTRGAA
WPRYLLSATF LNEIWFLSAT PPINRPLWSL SYEFWYYAIF GAWFFAKGGY KSYLPFLLIC
MVAGPKILCM MPIWLAGVAA YKYRGPVSSS NKVFVLIILL FCVVVVSVLS LPAIPYQLGR
SPLYYANQFI TDWISGLIFA FSLWLLPTVA QAPARPNRWI ERFRDVANMT FPLYVLHHPL
LILWRAVRGY QQGSPADMWQ AIAVVTLVSA VLGVLMDKQR FLWDRFFTFL LTNLKHLTQM
IPSSAHRAKV LVFNTAGKST VSARSEHDN