| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6219 |
|---|
| Symbol | |
|---|
| ID | 8730002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 7541184 |
|---|
| End bp | 7541573 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_003390977 |
|---|
| Protein GI | 284041047 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.314877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAC ACTATATCCT AGATGCAAAT GCTGTTATTG ACTACGTAGG GGATAGACTT
CCTGAATCAG CAGCTTTGGC AATGGACAAT CTCATCAACG ATAATCTCAC GACATCTATC
GTTGTTAAAA TTGAAGTTTT AGGTTTCGAT GGTGATCCTA ACGAGATGAA AAGGCTGAAC
GATTTTTTGG CATTATCAAC TATTCTTTAT GTAGACGATG CCGTTGCCAA TAAAACAATT
GACCTACGAA AGACACACAA AAAGCTTAAA CTGGGTGACG CCCTGATCGC TGCAACAGCC
CTTGTTCATG GCTTTACTAT CTTAACCCGC AATACGAAAG ATTTTCACCT TATCACCGGC
TTGGACTGTG TAAACCCACA TGGGTTATAG
|
|---|
| Protein sequence | MGKHYILDAN AVIDYVGDRL PESAALAMDN LINDNLTTSI VVKIEVLGFD GDPNEMKRLN
DFLALSTILY VDDAVANKTI DLRKTHKKLK LGDALIAATA LVHGFTILTR NTKDFHLITG
LDCVNPHGL
|
|---|
| |