Gene Slin_6210 details

Gene Information

• Locus tag: Slin_6210
• ID: 8729993
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: +
• Start bp: 7524939
• End bp: 7528364
• Gene Length: 3426 bp
• Protein Length: 1141 aa
• Translation table: 11
• GC content: 56%
• Product: heme-binding protein
• Protein accession: YP_003390968
• Protein GI: 284041038

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAAAAA ACGACGTTAG CCTGACCAGC AAGAAACTCC TCTGGCTCGG CGCGCTGGTG 
CCTACACTCT GTCTGGTAGG CTATCAGGTC GAGAAAGACC CGATAGATCG GCGGATCAAG 
CGGATGGACC CGGCCAAAGC TGCCCAATTA GCCAAATCCA TTGAGGCCAC CGTAACCCCC 
GAACTGGCCC AGGGGCTGAG CCTGAGTCTG TGGGGTGTCG ATTCGCTGGT GGCCGACCCC 
ATCGGCATCG ATATTGACGA CAACGGGCGG CTGTTCTACA ACCGAACCAA CCGACAGAAA 
AACTCCGAAT TCGATATTCG GGGGCACCAG GACTGGGAAA TCGAATCCAA TCGCCTGCAA 
ACGGTCGAGG ATAAACGGGC CTTTCTGCAC CGGGTACTAT CGCCCGAAAA CAGCAAGAAA 
AACGAATGGC TCAAAGATGT TAACGGCGAT GGGTCTCACG ACTGGCGCGA CATGACGGTG 
GAGAAAGAAA ACATCTTCCG GATTGAAGAC ACCGATGGCG ATGGCGTGGC CGATATGACG 
CAGTTGGTGG TCGATGATTT CCACGACGAA GTGACCGACG TAGCCGGGGG CGTAATGGCT 
CATGGTAATG ACTTATATGT GGCCGTGGCT CCGGACCTGT GGCGAATGCA GGACAAAGAC 
GGTGACGGTA TCGCCGAAAC AAAAACCTCG ATCTCGCACG GGTACGGCGT TCACGTAGGC 
TTTAGCGGTC ACGGTATGTC GGGTATCGAA ATGGGGCCGG ACGGGAAAAT CTACTGGCAG 
ATTGGCGATA TTGGCTTCAA TGGCAAAGGC CCGGATGGTA AGAAGTGGGA GCACCCGAAC 
AGTGGCGTGG TGGTACGTTC TAACCCCGAC GGAAGCGACT TCGAAGTGTT CGCCCACGGC 
GTTCGGAACA TCCATGAGTT CGTGTTCGAT GAATACGGTA ACCTGATCAG TGAAGACAAC 
GACGGCGACC ATCCGGGCGA AAAAGAACGT CTGGTTTACA TCGTGAACGG TTCCGATACG 
GGCTGGCGCA GCAACTGGCA GTACGGCAAA TACCGAGACC CCCGCAATAA CACCTACAAA 
GTGTGGATGG ACGAGCAGAT GTACAAGCCA CGCTTCGAAG GGCAGGCGGC TTACATTACC 
CCCACCATTA CTAACTACGT GAGTGGCCCT GCCGGTATGA AATACAATCC CGGCACGGCG 
CTGAGTCCGG CTTACAAAAA CATGTTTTTC GTGGCCGAAT TTGTTGGGAA CCCGGCTAAG 
TCGGGTATTC ATGCGTTCAA ACTGAAGCCC AAAGGCGCTT CGTTTGAGTT GGGCGAAGAG 
AAGCGGGTCC TGGGAAATGT ACTGGCTACC GGCATCGACT TTGGTCCCGA TGGGGCCTTA 
TACGTAGCCG ACTGGATCAA CGGCTGGGAC ACGAAAGATT ACGGCCGCAT CTGGAAGCTG 
GATGATAAAG CCGGTGCCGG TTCTGCCGAA CGGAAGTTGA CAAAAGCCCT GCTGGCCGAA 
AAATTTGCGG GTCGTTCGGA AGCGTCATTA GGCGATTTGC TGAAGAACCC CGACATGCGC 
GTTCGGCAGA AAGCCCAGTT CGAACTGGTG AAACGGGGTG CCAAAGGGGT GGAGGTATTG 
ACCGCATCGA TCAAGCAAAC CGGCAATCAA CTGGCGCGGG TGCATGGTAT CTGGGGCATT 
AGTCAACTGA CCCGTCAGGA TAAACAGTAT GGTCAGTTAT TGATGCCGTT ACTTCAGGAT 
AGTGACCCCG AAATTCGGGC GCAGGCCGCC AAATGGCTGG GCGATGTTCG CTACAAAGAA 
GCCGGTGCGG CCCTGATTCC ATTATTGAAA GACAGCTACA GCCGGGCGCG GTTCTTTGCC 
GCCGAAGCGC TGGGGCGAAT CGAATACGAA CCAGCCATTC AGCCCATTAT TAAACTGCTG 
GAAGCCAACA ACGACGAAGA TGCCTACATC CGTCATGCGG GTAGCCTGGC CCTGGCCCGG 
ATCGGAAAAG CAGAACCCGT TGTTGCGCTG GCAAGCAGTC CATCGCGGGC AGTACGCATT 
GCTGCGGTGG TGGCCCTTCG GCGCATGAGT AGCCCCGGTA TCGCTGCTTT CCTGGCCGAT 
AAAGACGAGT TTGTCGTAAC CGAAGCCGCT CGCGGTATCA ATGATGACCT GTCGATTCCC 
GAGGCTCTGC CAGCACTGGG TAAAGTCCTG CAAACGACGA GTTTTACAAA CGAACCCCTC 
ATCCGCCGGG CCATCAACGC CAATCTACGC GTGGGTACGC CGGAGGCCAT GCAAACGCTC 
ATGACGTATG CGCAGAAAGA AGGTAACCCC ATAGCGATGC GGGCCGAAGC CATGGACGCG 
CTCAGTACCT GGGCCTCCCC ATCGGTGCTG GATCGGGTCG ATGGCCGGTA CCGGGGCGTG 
GTTAATCGCG ATATGGCCGC TCTGAAAACA AAAACGGGCG ATGCATTTAT CAAACTGGTG 
TCGAGCACCG ACCAAACGCT GCGGCTCAGT GCCATCAAAT CCATTGAGCG AATGGGCCTC 
AAAGAAGCCG GTTCGGCCCT GTTTAGCCGG TTGACGGAGG ATAAAGAGCC AGCCATTCGG 
ATTGCCGCTT TGCGGGCACT GGCTTCCCTG AACGACGCCC AGCAAAGTAA AGCCATTGAG 
GTGGCCATGG CCGATAAGGA AAAAAGCGTG CGCGTGGCGG GTCTTGACCT GCTGAGCAAA 
ACCAACATGG ACAAAGACCG GATGGTGACG CTCCTCTCCG ACGTGATCGC TAACCGGACA 
ACCGAAGAAA AACAGGCCGC TCTGCTCACG CTGGGTAAAC TGCCGGTCAA AAATTCGCAG 
AAAGCGTTCG ACCCGTTGCT GGCCAAACTA CAGGCTGGTT CGCTCCCCGC TGAGTTGCAG 
CTGGAGCTGG GCGAGGCTAT TGAGAGCAGT AAATCGCCCC AGTTGGCAGC CCGGTACAAA 
GCGATCAACG ATAAAATGTC GCCCGATGCG CTGGCCGCTT CCTTCAAGGG TAGTTTGATG 
GGTGGTGAGC CGGATTTAGG TCGTCGGATT TTCTTCCGCC ACCAGACGGC GCAGTGTATC 
CGGTGCCACT CCTACGATGA TCTGGGCGGT AATGCTGGCC CGCGCCTGAA CGGGGTAGCC 
AGCCGACTCA CCCGCGAGCA GTTGCTGGAA GCACTCATCA ACCCCAGTGC CCGACTGGCA 
CCCGGTTTCG GAACCGTCAC GCTGAAGCTC AAGAATGGCA AAACCGTCAG CGGTATTCTA 
CAAGGCGAAA CCGATACGGA TGTATCCGTA AAAGTGGGCG ATCAGCCGGA TATCGCCATC 
AAGAAAGACC AGATCGCCAA GCGCACCAAC TCGCCATCGA GTATGCCCGA AATGAAGTAC 
CTGCTCACGA AACGCGAAAT TCGGGACGTG GTAAGCTTCC TGTCGACTCT GAAAGAGAAT 
AATTAG 

 

Protein sequence

MKKNDVSLTS KKLLWLGALV PTLCLVGYQV EKDPIDRRIK RMDPAKAAQL AKSIEATVTP 
ELAQGLSLSL WGVDSLVADP IGIDIDDNGR LFYNRTNRQK NSEFDIRGHQ DWEIESNRLQ 
TVEDKRAFLH RVLSPENSKK NEWLKDVNGD GSHDWRDMTV EKENIFRIED TDGDGVADMT 
QLVVDDFHDE VTDVAGGVMA HGNDLYVAVA PDLWRMQDKD GDGIAETKTS ISHGYGVHVG 
FSGHGMSGIE MGPDGKIYWQ IGDIGFNGKG PDGKKWEHPN SGVVVRSNPD GSDFEVFAHG 
VRNIHEFVFD EYGNLISEDN DGDHPGEKER LVYIVNGSDT GWRSNWQYGK YRDPRNNTYK 
VWMDEQMYKP RFEGQAAYIT PTITNYVSGP AGMKYNPGTA LSPAYKNMFF VAEFVGNPAK 
SGIHAFKLKP KGASFELGEE KRVLGNVLAT GIDFGPDGAL YVADWINGWD TKDYGRIWKL 
DDKAGAGSAE RKLTKALLAE KFAGRSEASL GDLLKNPDMR VRQKAQFELV KRGAKGVEVL 
TASIKQTGNQ LARVHGIWGI SQLTRQDKQY GQLLMPLLQD SDPEIRAQAA KWLGDVRYKE 
AGAALIPLLK DSYSRARFFA AEALGRIEYE PAIQPIIKLL EANNDEDAYI RHAGSLALAR 
IGKAEPVVAL ASSPSRAVRI AAVVALRRMS SPGIAAFLAD KDEFVVTEAA RGINDDLSIP 
EALPALGKVL QTTSFTNEPL IRRAINANLR VGTPEAMQTL MTYAQKEGNP IAMRAEAMDA 
LSTWASPSVL DRVDGRYRGV VNRDMAALKT KTGDAFIKLV SSTDQTLRLS AIKSIERMGL 
KEAGSALFSR LTEDKEPAIR IAALRALASL NDAQQSKAIE VAMADKEKSV RVAGLDLLSK 
TNMDKDRMVT LLSDVIANRT TEEKQAALLT LGKLPVKNSQ KAFDPLLAKL QAGSLPAELQ 
LELGEAIESS KSPQLAARYK AINDKMSPDA LAASFKGSLM GGEPDLGRRI FFRHQTAQCI 
RCHSYDDLGG NAGPRLNGVA SRLTREQLLE ALINPSARLA PGFGTVTLKL KNGKTVSGIL 
QGETDTDVSV KVGDQPDIAI KKDQIAKRTN SPSSMPEMKY LLTKREIRDV VSFLSTLKEN 
N