Gene Slin_6195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6195 
Symbol 
ID8729978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7506672 
End bp7508108 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390953 
Protein GI284041023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC ATCAATCCCT CAATCACGTC TGCCAACGGC TGTTTTATGT AAGTATACTG 
GGTTTTATGT CAATGGTCGA CATGAAGGCT CAGGCGCCCG ACTTTCAGAA AATGACGCCC
GAGGAGCGGA CAGCTTACAC AAAAAAAATG CGGGTCGCCA GTCAGGAAGA CTGGGCGAGG
ATGATGGGAA AGCTAAATCT TCCGCTGCCT GTACTTCCTT TACCTGCCAA CGACCCTAAA
CGTCCGCAGC AGTTGAAACA GAAGGAAGGT TCCAGCAACT GGTTCGATGA AGCGGGGCAA
ACGCACGTGC GGTCGGACTG GGGAAACTGG ACGAATTACG AGGAGGAAAA AGCAAATAAC
TACAAACTAC CCGATCCGCT GACGCTTAAA AACGGCAAGC CCGTAACAAC GGCGGCTATG
TGGTGGAAAC AGCGTCGGCC TGAAATTCTG AACGAGTACC TGACCGAGAT CTACGGTAAA
ACGCCAGCCA ATACCCCAAA GGTAACGTTT GGCCCTGCCG GAACGGATAG TACGGTACTG
GCGGGTAAAG CGGTTCGTAA AATGATACTG GGCCATATCG ACAATTTCCG GTATCCGTCG
GTCACGCCGA GCATTCCGGT TACGTATTAC CGGCCTGTTA AGGCATCGGG TAAGATTCCC
TTGATGGTGA TCGTGTGGGG TTCGTTCCCG CAGCCTATGG CCAACATCGA AAAACTGATC
GATGCCGGTT GGGGTGTAGC CCTGGTTAAT ACGGGCGCTA TTCAGATGGA CAGCGGGGCC
GGTTTGCACG AAGGCATCAT TGGCCTGATG AACGGCGGCA ACGACCGGCA ACCCGACGAA
TGGGGCGTAT TGGCAGCCTG GAGCTGGGGC CTTAGCCGGG TGCTCGATCA TTTTGAAAAA
GATAACGGCA TCAACGCCAG ACAAATTGGT ATTCAGGGCC ATTCGCGCTG GGGCAAAACG
GCTCTGCTGG CCGGAGCACT CGACCCGCGC TGGGCTATCG TGTTCGCCAG TTGCTCGGGG
TCCATGGGCG CGTCGCTGGA AAAACGCAGC TTCGGCGAAA CGATCGACAA CGTGGCTGCT
CCGGGCGAGT ACCACTGGAT GGCGGGTAAC TTCCTGAAAT ACGGCGGCAA CTGGAAAATG
ATGCCCGTAG ATGCCCATGA GCTAATGACG CTGATTGCCC CTCGTCCGCT CTTCATTACG
GGTGGCACAA AAGACACCTG GGCCGATCCC AAAGGTGAGT TCCTGGCCTG CATTGCCGCC
AGCCCTGTTT ATACCTTACT CGGTAAAAAA GGAGTTGGCG CCACCGAAAT GCCCGGGCCG
GATGTGTCGC TGATCGACGG TGAGCTGGCA TTCCGAAACC ACGAAGGGGG CCACGTCGAC
TCGCTCGACT GGCCGGTTTT TCTGGAATTT GCGAAGCGGG AGTTGCAGTT GAAATGA
 
Protein sequence
MKRHQSLNHV CQRLFYVSIL GFMSMVDMKA QAPDFQKMTP EERTAYTKKM RVASQEDWAR 
MMGKLNLPLP VLPLPANDPK RPQQLKQKEG SSNWFDEAGQ THVRSDWGNW TNYEEEKANN
YKLPDPLTLK NGKPVTTAAM WWKQRRPEIL NEYLTEIYGK TPANTPKVTF GPAGTDSTVL
AGKAVRKMIL GHIDNFRYPS VTPSIPVTYY RPVKASGKIP LMVIVWGSFP QPMANIEKLI
DAGWGVALVN TGAIQMDSGA GLHEGIIGLM NGGNDRQPDE WGVLAAWSWG LSRVLDHFEK
DNGINARQIG IQGHSRWGKT ALLAGALDPR WAIVFASCSG SMGASLEKRS FGETIDNVAA
PGEYHWMAGN FLKYGGNWKM MPVDAHELMT LIAPRPLFIT GGTKDTWADP KGEFLACIAA
SPVYTLLGKK GVGATEMPGP DVSLIDGELA FRNHEGGHVD SLDWPVFLEF AKRELQLK