Gene Slin_6146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6146 
Symbol 
ID8729927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7453300 
End bp7454313 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content47% 
IMG OID 
Productfatty acid hydroxylase 
Protein accessionYP_003390905 
Protein GI284040975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.119342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATTT TCGAAATCCT TTACCACGAA TTCGTCGGGT TCTGGGGGTT TGACCAGCTT 
TGGGAAATCA TTCAGACGCA GAACTATGAA GCGCTGCTGA CCCAGAAAGG TATTCAGGCT
TTTTTAAGAC CGGTCCTTCC AGTACTTCTG TTGATTGAGA TTATTCGTGG GCTGTTTTAC
CGGCGCTACT CGCATGACCA GTACAAAATT TCTGTGTTCA CCTATATCCT GAACCGCTTT
ATTTCCAGCT TCCTGTCGAT TGCGATGGTT GCTTTCTGCA TTGGGCTGTT TGAGCCTTAT
GCACTTATAA AGACATCATT TACCTGGTAC TGGTTTATAT ATGGGTACGT GGTTTGGGAG
CTAGCCCATT TTGTCTATCA TTATTTCGGG CATAAAGTTC GGCTCTTCTG GTGCCTGCAC
TCTACCCACC ACGCACCGGA GTACATGAAC CTGTCCGTAA CCTACGCGCA CTTTTTTCTC
GAAGCGCCCT ACGCCGATAT CATCCGTACC ACCATCTGTA TTCTGCTGGG CGTAAATCCT
CCCTTGCTTT TTCTCATCAT GTTCATCGAC GGAACCTGGG GATCGTTTAT CCATATTGGC
GAGAATCTGC TCAAAGACGG GCGGCTGGGC GTCTTGAATA AAATTATTCT TACACCATCG
CATCACCGCG TACATCATGC CCGCAATCCA TTGTATATGG ACACCAACTT TTGCAATCTC
CTGAACATAT GGGATAGAGC CTTTGGTACC TTACAGGATG AAAAAACAAC GATGGAAATT
GAATACGGCA TTAGCCGCCC CATGAAAAAA GGCGATTTTC TGGATGCTTA CTTTGGCGAG
ATTGTCGCGC TGGGCAAGGA TGTGTACAGG GCGCCGGGTC TTAAAAATAA ACTCCTCTAC
ATCATTATGC CTCCAGGCTG GAGCCATACC GGCGATCATA AAACCGCTAC GGTTGTCAAG
GCCCATTATA TCCGGGAGCA CCAGCAGGAA CTGAGTTTCG ACGAACGGGT CTGA
 
Protein sequence
MHIFEILYHE FVGFWGFDQL WEIIQTQNYE ALLTQKGIQA FLRPVLPVLL LIEIIRGLFY 
RRYSHDQYKI SVFTYILNRF ISSFLSIAMV AFCIGLFEPY ALIKTSFTWY WFIYGYVVWE
LAHFVYHYFG HKVRLFWCLH STHHAPEYMN LSVTYAHFFL EAPYADIIRT TICILLGVNP
PLLFLIMFID GTWGSFIHIG ENLLKDGRLG VLNKIILTPS HHRVHHARNP LYMDTNFCNL
LNIWDRAFGT LQDEKTTMEI EYGISRPMKK GDFLDAYFGE IVALGKDVYR APGLKNKLLY
IIMPPGWSHT GDHKTATVVK AHYIREHQQE LSFDERV