| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6125 |
|---|
| Symbol | |
|---|
| ID | 8729906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7424281 |
|---|
| End bp | 7424997 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, LytTR family |
|---|
| Protein accession | YP_003390884 |
|---|
| Protein GI | 284040954 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTA ATACGCTCGT TATTGACGAT AATGCCAATT GGCGCAAGAC TATTGGCAAA
TTTGTTGATA TACACCCGCT CCTGGAATTG GTAGATACCT GCGATTCGGC AATGGATGCC
TACGCTAAAA TGATGGTGCA TGATATCGAC TTACTAATCT GCGATATTGA AATGCCCGAA
CTAACGGGGC TGGGGCTGGT CAGAAGCCTG CAGAATGGCC CACTAGTTAT ATTCGTTACT
TCCCATGCCA ATTACGCGCT CGACTGTTAT GAGGTGTCGC CAGTTGATTT TCTCTTAAAA
CCACTGGACC CAGAGCGGTT TTTAGCCAGT ATCGAGAAAG TGAAAAAGCG GCTTACCGTA
GCATCGGAAC CGATTACGCC AGCTCCTTAT TTCTTTATCC GGGAAAGTAA TAATTACGTT
CAGATTCGTT ATCAGGACGT GCTCTACATG AAAGCACAGG AGCATTTTTT GCAGATTTTT
ACCCGCGACA AATCATACAT GCCCATGCTC TCGATCAGCA AAATGGAGGA GCAACTTAAA
GGCGATGTTT TTCTTCGGGT ACATCGGTCG TTTCTGGTCC ATCGATCGGC TATTGCGGTC
ATTACTAAAA ATGATCTGGT TTTGACAACG GGCGAGACCA TACCCATCGG CGACCAGTAT
CGGGCTCAGA TCAACCGTAA GCACATTAAT ATGAACGTGG TTAGCCGCCG GAGCTAG
|
|---|
| Protein sequence | MKINTLVIDD NANWRKTIGK FVDIHPLLEL VDTCDSAMDA YAKMMVHDID LLICDIEMPE
LTGLGLVRSL QNGPLVIFVT SHANYALDCY EVSPVDFLLK PLDPERFLAS IEKVKKRLTV
ASEPITPAPY FFIRESNNYV QIRYQDVLYM KAQEHFLQIF TRDKSYMPML SISKMEEQLK
GDVFLRVHRS FLVHRSAIAV ITKNDLVLTT GETIPIGDQY RAQINRKHIN MNVVSRRS
|
|---|
| |