Gene Slin_6080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6080 
Symbol 
ID8729861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7377255 
End bp7378214 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content47% 
IMG OID 
Producttranscriptional regulator, MarR family with acetyltransferase activity 
Protein accessionYP_003390841 
Protein GI284040911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCT TTGAAAAAAC GGGTAAGGTG GCACTCGGTA GCCGTCTACG TATCTTAAGC 
GCCAGAATGA CAGACGATGC GGCCAGGATC TACCAGATGT ATGAGGTCGA TTTCTCACCA
AAATGGTTTC CCGTCTTTTT TCTGCTCGCG CAGGAAGGGG AGAAATCAGT AACTGAGCTT
GCTATCGAAG TGGGCCACTC GCAGCCATCA GTTACCAAAA TCATTAAAGA AATGATTGCT
GCTGGTTTGG TTCAGGAGAA ACTACAAGTC GATGATAAGC GGAAGACCGT TGCCGAACTG
ACCCAAAAAG GCAGGGAGGT TGCGGCTAAA GTGCAGCTCC AAAGCGAAGA TGTTGATTTG
GCCATAGACG CATTGATCGC TGAATCCAAC CACAATCTAT GGGAAGCACT CGCTGAATGG
GAATACTTAC TAGACCAAGA ATCGTTGCTG CGTCGGGTGC AGCAGCAGAA GAAACGGCGG
GAGAGTAAAG ATGTTAGGAT TGTACCCTAT GAAGACAAGT ACCAATCGGC TTATAAAGCG
TTGAACGTCG AATGGATTTC CACCTTTTTT AAGATGGAGG AAGCCGATTA CAAAGCGCTG
GATCATCCGC ATGAATACAT TCTGGATAAA GGAGGTATGA TATTCGTCGC TCTCTACAAA
GACGAGCCAC TGGGTGTTTG TGCACTCATC AAATGCAACG AAGGCCCCTA TGGATTTGAG
TTGGCAAAAA TGGCTGTTTC ACCCAAAGCA CAAGGAAAAA ATATTGGCTG GTTACTGGGA
ATGGCAGCTA TTGACGCAGC CAGGCAGGCT GGCGCGTCCA AAATTTTTCT GGAAAGTAAC
ACGATGTTGA AGCCTGCTAT CGGGTTATAT CAGAAGCTGG GTTTTCAGAA AATAGTTGGC
ATTCCCAGCC CTTATGAGCG CTGCAATATC CAGATGGAGT TAAGTCTTAC GCATCAATAG
 
Protein sequence
MTVFEKTGKV ALGSRLRILS ARMTDDAARI YQMYEVDFSP KWFPVFFLLA QEGEKSVTEL 
AIEVGHSQPS VTKIIKEMIA AGLVQEKLQV DDKRKTVAEL TQKGREVAAK VQLQSEDVDL
AIDALIAESN HNLWEALAEW EYLLDQESLL RRVQQQKKRR ESKDVRIVPY EDKYQSAYKA
LNVEWISTFF KMEEADYKAL DHPHEYILDK GGMIFVALYK DEPLGVCALI KCNEGPYGFE
LAKMAVSPKA QGKNIGWLLG MAAIDAARQA GASKIFLESN TMLKPAIGLY QKLGFQKIVG
IPSPYERCNI QMELSLTHQ