| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6054 |
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| Symbol | |
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| ID | 8729835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7347634 |
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| End bp | 7349133 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003390815 |
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| Protein GI | 284040885 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGT TTCAGAAACT CATTACATAC ACCTGCATTG GCGGTCTGGT GATTGCCAGT
GGCTGTTCCA AATCGTTCCT GGATGTGCCG CCCCAGGGCC AGCAAACCCC AACGGACTTC
TTTTCGAGTA ATGCCGATGC GGCTACAAGC CTTGTCAATG CCATTTATTC CAAGATGGTC
GACTGGAATT TCCACTCCTT CTCGTGGAAT GGCATTACGA GTATTGCTTC GGATGATGCC
GATAAAGGCA GCTCGCCGGG CGATACCGGC ACCGACAAAG ATCAGCTGGA TAATTTCACG
TTTACCCCTT CGAGTGTTTC GTTCAACGAA GTGTGGGGTG GGCATTACGA AGCCATTGCC
CGCGCCAATC AGGCATTGGA CAATCTCCCG GCGCTGACGA TCAACGACAC CCTGAAGAAC
CGGCTCATCG GCGAAGCCAG CTTCCTGCGG GCCTACTGCT ACTTCAACCT CGTTCGCTCG
TTTGGCGGGG TGCCGCTGAT CACCAAAGTG GCCGACCCAA CCAATGCCAG CGATATTCAG
CAGGGGCGGG TGCGGGCAAC GGCGGCACAG GTGTACACGC AGATTGAAAC GGATCTGGCA
ACGGCCGTCG CCAATCTGCC CGAGAAATCG CAGTATAACG CGGCCGATTT GGGCCGGGCT
ACCAAAGGAG CTGCCAAAGC CCTGCTGGCT AAAGTGTCCA TGTACGAAAA GAAGTGGAAC
GTGGTGCTGC AATTAACCGA TGAGATCATT GCTTCGGGGC AGTACTCGCT GCAACCCAAC
TATGCTGAAC TCTGGCGCGA ATCGTCGGAG AATGGAGTGG AGTCGATCTT CGAGATTCAG
GGCCGGGGTG TAACCCCGAA TAAAGGGGTG CAGGGCTACT TTGAGACACA GGGTGCCCGG
GGCGAGAATG GCTGGGGCTG GGGTTTCAAC ACGCCATCCG AAGACCTGGT GAAAGCCTAC
GAAACCGGCG ATACCCGGAA AAATGGCACC ATCATTCAGC GTGGTATGAC GCTCTGGGAT
GGCCGGGTAG TGAGCCCGAA CGCCGAAAAT CCATATTATA ACATGAAAGC GTACGTGAGC
TTCAGCCGGG AAACGAACAA CGGCAACACC TGGGAAACGA GCAAGAATGT TCGGGTGCTA
CGTTATGCTG AAGTGCTGCT GATGAACGCC GAAGCCGCCA ACGAACTTGG CCAGCCAACC
AAAGCCCTCA CGGCGTTGAA TCAGGTGCGG GCCCGGGCGC GGGGTGGTGT TGCAACGGCC
TTGCCAAACG TAACGACAAC CGCCCAGACC GGTTTACGTC AGGCGATCTG GAACGAGCGT
CGGGTCGAGT TAGCGTTTGA ACACGACCGC TATTTCGATC TTGTTCGTCA GGGACGCGCA
GCGGCTGTTT TTCAGGCCCT CGGCAAGAAT TTTGTAGCCG GTAAGCACGA AATATTCCCG
ATTCCACAGC CGCAGATTCA GTTGAGCGGT GGGCAGTTGA CGCAGAATCC GGGGTATTAG
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| Protein sequence | MKTFQKLITY TCIGGLVIAS GCSKSFLDVP PQGQQTPTDF FSSNADAATS LVNAIYSKMV
DWNFHSFSWN GITSIASDDA DKGSSPGDTG TDKDQLDNFT FTPSSVSFNE VWGGHYEAIA
RANQALDNLP ALTINDTLKN RLIGEASFLR AYCYFNLVRS FGGVPLITKV ADPTNASDIQ
QGRVRATAAQ VYTQIETDLA TAVANLPEKS QYNAADLGRA TKGAAKALLA KVSMYEKKWN
VVLQLTDEII ASGQYSLQPN YAELWRESSE NGVESIFEIQ GRGVTPNKGV QGYFETQGAR
GENGWGWGFN TPSEDLVKAY ETGDTRKNGT IIQRGMTLWD GRVVSPNAEN PYYNMKAYVS
FSRETNNGNT WETSKNVRVL RYAEVLLMNA EAANELGQPT KALTALNQVR ARARGGVATA
LPNVTTTAQT GLRQAIWNER RVELAFEHDR YFDLVRQGRA AAVFQALGKN FVAGKHEIFP
IPQPQIQLSG GQLTQNPGY
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