| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6053 |
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| Symbol | |
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| ID | 8729834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7344601 |
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| End bp | 7347621 |
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| Gene Length | 3021 bp |
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| Protein Length | 1006 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003390814 |
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| Protein GI | 284040884 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TTGGTTACTT TTTAACGGTA ATCTGGCTTG TTGTTTCTGG TAGTATACAA
GCTCAGGATC AGCAGGTTAC GATTACGGGG AAGGTTGTCA ACAAAGCGGA TAAGCAGGGC
CTTCCGGGCG TCAACGTTTT GGTACGCGGA ACAACAACCG GCACGGCTAC CGATGTAGAG
GGGAATTATA AGATCAATGT CCCCAGTGGT GCGGTGCTTC AGTTCAGTAT GATCGGGATG
ACTACTCAGG AAGTTCCGGT AGGCAATCAA ACAACCATCA ACGTTGAACT CGCCGACGAC
GCCCGCGCCT TACAGGAGGT TGTCGTAGTC GGTTACGGTA CGCAGCGCAA AATCGACGTG
ACCGGCTCGG TGGCGCAGGT GAAGGGCGAA GAACTGGTAC GGCAGCCGGT GCTGTCGGCA
ACGCAGGCCC TGCAAAGTAA AGTGGCAGGA GTGCAGATCA TCAACTCCGG CGCACCGGGG
CAGGCTCCCA CCGTCCGGAT TCGCGGAACA GGTACGCTAC TGGGCGGGGC CGACCCGCTC
TACGTGGTCG ACGGGATTAT TACCGAAGAC ATTCGGAACA TCAACACCTC CGATATTACC
TCGGTCGACA TCCTGAAAGA TGCCTCGGCA ACGGCTATTT ATGGCGTTCG AGCGGCCAAT
GGCGTCGTAC TGATTACGAC AAAACGCGGC AAATCGGGCG CACCTACTGT CAGCTATGAT
GCGTATGTGG GAGTTCGGAC GCCCGCCTAT CGGGTAAAAA TGGCCGATGC GCAGTTGTTT
ACGCAATACA ACAACGAAGC GGTTCGCTAC GACGATCCGA CAGCCACGCT GCCCTTCGAC
CCGGCGGCTA CCAATGCAGC CAACACCGAC TGGTTCAAGG CCATTACCCG GACGGGTATT
CAGCAGAATC ATTCGCTCTC TGTTAGTGGC GGCACGGACA AAACCACTTA TCTGTTCAGC
GCGGGTTATT TCAGCGAAAA AGGGATTCTG AAAGGAACGG ACTACAACCG CCTGACCCTG
CGCCTGAACA ACGAGTACAC GCTGTCGCCG GTGCTGAAAC TGGGACACAA CCTGAGTCTG
GCCAACGACA ACTCGGATCT GACGGGCACT TCCGACCCTG CCATACCGAG CACAACGGCC
TATTCTGCTT TTACGAATGC CTACAAACAG GCTCCGGTCG TGCCGATTCG TAACGCCAAT
GGAACCTACG GATTTACCGC AAGGAACAAC GTAGCGAATC CCGTTGCGCA ACTGGATTAC
ACCAATTACA ACGCGAAAGG ACTACGGCTA CAGGGGTCGT TCTACGGCAA CCTGACACTG
CTGAAAAAGA TCACGGTGCT GTCGAATTTC GGGATTGAAA GCAATGCCAA CCGAGCTTAC
AACTATGATC CGGTCTATCA GGTATCGGCC AATCAGCGCA ACCTGACGAG TTCATTGAAC
GTTGGCCGGT CGACCAGTTC GCGCTGGCTA TGGACCAACA CGGCCGAGTA TACCAACACC
TTTGCCAAAC AGCATACGGT GAAGATTCTG GGTGGGTATG TGGTCGAACG GTTCCAGAAC
AATATTCTAC AATCGGCCCG GCAGGATGTG CCGCCCCAGT CGAACTATTT TTACCTGAAC
ACGGGCAATG CCTCGTCGGC CACGAACAGC GAAGTGGGCA GCATTCAGAC CCGGCAGTCG
TACATTGGCC GGGTAAACTA TAACTTCGCC GACCGCTACC TGTTTACCGG TACGGCGCGG
TACGATGGGT CGAGCAAGTT TCCGACCAAC AACCGCTGGG GTTTCTTCCC CTCGCTGGGC
GCGGGCTGGG TCATCAGTGA AGAGCCGTTT CTGCGGGGCA AAACCCCTTT CGATCAGTTG
AAAGCGCGGG TAAGCTGGGG TAAAACCGGG AACGACCGCA TCGATCCGAG CGCGTTTCAG
TATACCATCG CCAGCGGATT GGATTATCCA CTCGGGCCTA ATCAAACCCT GCAACAGGGC
CGCACGATCA CCAACCTGAT CGACCCGAAT CTGCATTGGG AAGTAACGAC CGGTACGGAC
ATCGGTCTGG AGTTTGCCCT CGCCAAGAAC CGGCTGACGG GAGAATTTAC GTATTACAAC
AAACTCACCA GCGACGCCCT GTTCCAGCGG CCCATCGACG CCATTTTTGG TGATGTCGAC
GCGGCTTACC TGACCAATGC CGCCAGCGTA CGCAACCGGG GATTTGAATT TGCCCTGAAC
TGGCGCAATA ATTCTACCAG CGGCTTCAAC TACAACATCG GGGCAAACGC GACCATCAAC
CGCAATCGAC TGGAAGATGT GCAGGGCGGC CTGCCGATCA ATGAAGGCGG CATTGGCAAC
GGGCAGTACA CGACACGCAC GGCGGTGGGT CAGCCGGTGG GTAGTTTCTG GGTATGGCAA
ACCGATGGTA TTTTCCAGAC ACAGGAGCAG GTGAACAATA CGGCGGCTAA AATCCAGGGC
ACCAAACCCG GCGACTTCCG TTACGTCGAC CAGAACGGCG ATGGTGTTAT TGACGACAAC
GACCGCGTGT TTGTCGGCTC GTATCAGCCC AAACTGTATT TCGGTATCAA CGGCGGCTTC
ACCTACGACG GCTTCGACTT CTCGACCGAT TGGTACGCCA ACTTTGGCAA TAAAGTCTAT
AATGGTAAAA AGGCGCAACG GTTTGGTAAC GAAAACATCG AAGCCTCCCG CGCCGACCGC
TGGACGTCAA CCAACCCCAG TAACACCGAG CCACGCGCCA GTAATTCCGT GCCCATTTCG
TCGACCTATT ACGTCGAATC GGGGTCGTTC TTCCGAATCA ACAACATAAC GCTGGGCTAT
ACCTTGCCGA AAGAGCTGGT GTCGTCGCTG AAAGTGAACC GGGTGCGGTT TTACGTGACG
GCTCAAAATG CGCTGACGAT CAAAGCGTTC TCCGGATATA CGCCCGAACT GCCTGGCAGT
AATCCGCTGA ACGCCGGTAT CGAGCTGGGC ACCTATCCGG TCACGTCGGC TTATTTGGCA
GGTCTGAATA TTGGCTTTTA A
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| Protein sequence | MKTLGYFLTV IWLVVSGSIQ AQDQQVTITG KVVNKADKQG LPGVNVLVRG TTTGTATDVE
GNYKINVPSG AVLQFSMIGM TTQEVPVGNQ TTINVELADD ARALQEVVVV GYGTQRKIDV
TGSVAQVKGE ELVRQPVLSA TQALQSKVAG VQIINSGAPG QAPTVRIRGT GTLLGGADPL
YVVDGIITED IRNINTSDIT SVDILKDASA TAIYGVRAAN GVVLITTKRG KSGAPTVSYD
AYVGVRTPAY RVKMADAQLF TQYNNEAVRY DDPTATLPFD PAATNAANTD WFKAITRTGI
QQNHSLSVSG GTDKTTYLFS AGYFSEKGIL KGTDYNRLTL RLNNEYTLSP VLKLGHNLSL
ANDNSDLTGT SDPAIPSTTA YSAFTNAYKQ APVVPIRNAN GTYGFTARNN VANPVAQLDY
TNYNAKGLRL QGSFYGNLTL LKKITVLSNF GIESNANRAY NYDPVYQVSA NQRNLTSSLN
VGRSTSSRWL WTNTAEYTNT FAKQHTVKIL GGYVVERFQN NILQSARQDV PPQSNYFYLN
TGNASSATNS EVGSIQTRQS YIGRVNYNFA DRYLFTGTAR YDGSSKFPTN NRWGFFPSLG
AGWVISEEPF LRGKTPFDQL KARVSWGKTG NDRIDPSAFQ YTIASGLDYP LGPNQTLQQG
RTITNLIDPN LHWEVTTGTD IGLEFALAKN RLTGEFTYYN KLTSDALFQR PIDAIFGDVD
AAYLTNAASV RNRGFEFALN WRNNSTSGFN YNIGANATIN RNRLEDVQGG LPINEGGIGN
GQYTTRTAVG QPVGSFWVWQ TDGIFQTQEQ VNNTAAKIQG TKPGDFRYVD QNGDGVIDDN
DRVFVGSYQP KLYFGINGGF TYDGFDFSTD WYANFGNKVY NGKKAQRFGN ENIEASRADR
WTSTNPSNTE PRASNSVPIS STYYVESGSF FRINNITLGY TLPKELVSSL KVNRVRFYVT
AQNALTIKAF SGYTPELPGS NPLNAGIELG TYPVTSAYLA GLNIGF
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