Gene Slin_6021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6021 
Symbol 
ID8729802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7302654 
End bp7302944 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content49% 
IMG OID 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_003390782 
Protein GI284040852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.088486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.298302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTT GGGTACTCTA CGATATTGTT AAGGACAAGT CGCGCACGAA AGCGGCCAAA 
CGGTGTCAGC AAGCGGGTTT ATACCGGGTG CAGTTCTCGT GTTTTCTGGG GACGCTCACG
CAGAACCAGA AAGACACCCT GCAACTGCAA CTGGAAGAGC TGATCGACGA AGAAACCGAC
AAGGTGTATA TTTTTCCGAT GAGCCGGGGC GAGTTACAGC AAACGGCACT GTTGGGACAA
GCGTTCGATA AGAAATTAGT GACCGACGAA ATCAGAGCGT TATTCTTTTA G
 
Protein sequence
MIIWVLYDIV KDKSRTKAAK RCQQAGLYRV QFSCFLGTLT QNQKDTLQLQ LEELIDEETD 
KVYIFPMSRG ELQQTALLGQ AFDKKLVTDE IRALFF