| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6010 |
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| Symbol | |
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| ID | 8729791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7291161 |
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| End bp | 7292549 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003390771 |
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| Protein GI | 284040841 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.750386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTACAA GACTTATTAC CAGACACATC CGCTGTCTGG GACTACTAAT CCCGCTATCG
ATAGCTGCAC AGCCCGCTCC AACCGGCGTT TCGGCGGTGC TGGAAGGGTA CGTTCGCGAA
GGGCTTACCA ACAACCTCGC ACTCCGGCAG GAGTCGCTGG AAATCAGCCG CGTAACGGAA
TCCCTCAATC AGGCGAAATC GCTGTTTTAC CCACGAGTGG CCTTCAGCCC GACCTATTCA
CTGGCCGCTG GTGGCCGACG GCTGGAGTTT CCGGTGGGCG ATCTGCTCAA CCCTGCTTAC
AAAGCCCTCA ACCAGCTTAC CGGTGCCGAC CGTTTCCCGA CAAACATCGA AAACGTCAAC
CAGCTGCTGG CACCCAACAA CTTTCATGAC ACCAAATTCA GTGTCAGCTA CGCTATTTTC
AATACGGATA TTCAGTACAA CTACCTTATT CAAAAACAAC TACTCACTTC ACAGCAGGCC
CGTCGGCGGG TTATTGAAAA CGAATTGCGG TACACCATCG CTACAGCTTA CTACCAATAC
CTGCAAACGC TCGACGCTAT ACGCATCTTC GAGAGTTCGC GCGATGTACT TGCAGAGCTA
ACCCGACTGA ACGAAAAGTT GGTCCGTAAC AATGTGGCCA CGAAAGAGGT GGTGACCTCG
GCACGCTACG AAACCAGCAA GCTCGATCAG CAGCTGGCAG TGGCGCAGAA AAACCGCGAA
ACAGCCCGCG CCTATTTCAA CTTCCTGCTC AACCGCGATT TGCAGGCTCA CATCGACGTC
GATTCTTCGC TCACGAGAAT CCTGCCCGAG TCGCCGGAAA ACGTAGCCGA TTTGCAACGG
ACCGCCCTGC TGGGTCGTCA GGAGCTCAGC CAGGTAACTA GCTCACTGGG AGCGGCTCAA
ACGGCGGTAA AGCTGGCCGA GGCCAACGCC AACATCCCGA ATGTCTTTGT GGGTGCCAAT
ACGGGTTTTC AGGGTTTCGG CTACACGTTC CAGAACCAGG CCTATGTAGT GGCGCAGGTA
GGTTTGCAGT GGGATCTGTT CCGGGGATAC GAAAAACGGT CGAAGATTCA ACAGGCTAAA
ATTCAGGCCA ATGCCCTGCA AACGCGCCTA ACGGAGGTGC AGCAACAGAT TCAATTGCAG
GTGTTACAGG CCTACTACGA CCTCGATGCC GCTACGAAAA GTCTCGACGC TACGCAAAGC
GGGATGGTCA ACGCCGACCA GACGTTCAGG GTAATCGACA GTAAATACCG GAACGGGCAA
TCGCTGCTGA TCGAATTTCT GCGCTATCAG AACGACCGGC TAACGGCCCA GCTTCAGCAT
TCACTGGCGC GTATGGATGT ACTCGTAAAA CGGGCCGCCC TGGACCGCGC CGTGGCCATT
GGGCAGTAG
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| Protein sequence | MVTRLITRHI RCLGLLIPLS IAAQPAPTGV SAVLEGYVRE GLTNNLALRQ ESLEISRVTE
SLNQAKSLFY PRVAFSPTYS LAAGGRRLEF PVGDLLNPAY KALNQLTGAD RFPTNIENVN
QLLAPNNFHD TKFSVSYAIF NTDIQYNYLI QKQLLTSQQA RRRVIENELR YTIATAYYQY
LQTLDAIRIF ESSRDVLAEL TRLNEKLVRN NVATKEVVTS ARYETSKLDQ QLAVAQKNRE
TARAYFNFLL NRDLQAHIDV DSSLTRILPE SPENVADLQR TALLGRQELS QVTSSLGAAQ
TAVKLAEANA NIPNVFVGAN TGFQGFGYTF QNQAYVVAQV GLQWDLFRGY EKRSKIQQAK
IQANALQTRL TEVQQQIQLQ VLQAYYDLDA ATKSLDATQS GMVNADQTFR VIDSKYRNGQ
SLLIEFLRYQ NDRLTAQLQH SLARMDVLVK RAALDRAVAI GQ
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