Gene Slin_5983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5983 
Symbol 
ID8729764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7251578 
End bp7252666 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content49% 
IMG OID 
ProductA/G-specific adenine glycosylase 
Protein accessionYP_003390744 
Protein GI284040814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.868735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATTGGC AATCAGACTC TAACGATATC GAAATCACTT TTGCTCCTAC CCTTGAGCAG 
TGGTATAGTG TCCATAAACG TGACCTCCCG TGGCGTCATA CACTTGATCC ATACTACATC
TGGTTGTCTG AAATTATACT CCAGCAAACC CGTGTAGCCC AGGGTAAACC CTATTATGAA
CGCTTCGTTG ACGCTTACCC GACCATCTCG GATATGGCGA ATGCCGATGA ACGTAAACTC
CTGCGTCTCT GGCAGGGGCT CGGCTATTAT TCGCGGGCCC GAAATCTCCA CCAGACTGCC
CGCTACGTAA CCGAGAAACT GGATGGTAAG TTTCCGAACA CGTATCATGA CTTATTGAAA
ATGAAGGGGA TAGGAGCCTA TACGGCTGCA GCTGTAGCTT CTTTCGCCTT TGGCGAACGC
GTACCCGTTG TGGATGGGAA CGTGTATCGG GTACTGGCGC GGGTGTTTGG TATTACCGAG
GATATCACGA CAACAACCGC CAAAAAAACG TTTGCTGCAC TGGCTACACG GCTGATGCAG
GCGGCAGTTG ACCCGGCCAC GTATAATCAG GCCATCATGG AGTTTGGGGC CATACACTGT
ACACCCGTTG CCCCCGACTG TTTGCTTTGT CCTGTTCAGC AGCAATGTGT CGCTTATTTA
ACTGGTCGTC AGCATCAATT ACCCGTTAAA TCAAAAAAAG CTCCGGTTCG GGAAAGATTC
TTCAGTTATG TGGTTTTTCA ACAAGGTGGA CGCCTGGCGC TTCAGGAACG AGTGGCCCGC
GACATCTGGC AAAATCTGTA TGATTTTTAT CTGGTAGAAA CCGATGAGCC TAAAACTGCG
TTGCGGGATA TACCTTTATC CGAATCAGTG AGTAGTTTAG TGAATCGGGG AACGCTGGTC
GAAGCGCCGG TTGAAGCAAT GCAGCTTTTG TCGCATCAGC GAATACGTGC CTATTTTTTT
CTGGTTGACT TACCCGAAAC CGAAACTGGC AGTTTGCCGA TTGGTTTACA GTGGTATTCA
CTGGCTGAAA TAAGTATACT ACCGAAGCCG GTTTTGATTA CAAACTATTT GGCGAAACAG
TTTGCATAA
 
Protein sequence
MDWQSDSNDI EITFAPTLEQ WYSVHKRDLP WRHTLDPYYI WLSEIILQQT RVAQGKPYYE 
RFVDAYPTIS DMANADERKL LRLWQGLGYY SRARNLHQTA RYVTEKLDGK FPNTYHDLLK
MKGIGAYTAA AVASFAFGER VPVVDGNVYR VLARVFGITE DITTTTAKKT FAALATRLMQ
AAVDPATYNQ AIMEFGAIHC TPVAPDCLLC PVQQQCVAYL TGRQHQLPVK SKKAPVRERF
FSYVVFQQGG RLALQERVAR DIWQNLYDFY LVETDEPKTA LRDIPLSESV SSLVNRGTLV
EAPVEAMQLL SHQRIRAYFF LVDLPETETG SLPIGLQWYS LAEISILPKP VLITNYLAKQ
FA