Gene Slin_5981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5981 
Symbol 
ID8729762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7250199 
End bp7251095 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390742 
Protein GI284040812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTA CCCTTATGAA TAAATCTGTG TTGTTTGTTA TCATCCTGGC TTCGGCCCTG 
ACGGTTGGGT TATACTCCCT CCCCAAGGTG GTTGTGCGTA ATGACAGCAA GCAGCTTAGT
GCAGCCAGCG AGGGAGGTCA TGCGACGCAA ACGCCCACAG TTGCCCAATC GGGTGCCGAT
TCACTCAACG TTACAGCGAA AGGAAATGGA GCCGATGCGT CGGTAATTCA TGAGAAACCC
ATATCGCCGG AGCAACAGAA ACGCATACGA ACACTGGAAA CGGAGTTTGC TTCAGCAGGA
CCAGCACAGA AAGAACCCGT TGGCGAGAAG TTAATTGCTA TTTTCCGCGA CCTGACCCGC
TATGACAGCG CGGCCCATTA CGCAGGTTTA GTAGCTATGG CACAGCCTAA TGAGCGAAAT
CTGCTGCGTG CAGGCGATGA GCATTTCGAA GCGTACACGT TTGCTGTAGA CGACAAGAAA
ACCGCTCAGC TGGGTCAGAA AACCCGAGAG TTCTATCAGC AGGCACTGGC TAAAAACCCA
AATCTGCTGT CGGCAAAAGC TAATATGGCA ATGACCTACG TCAACACCGA TACGCCTATG
CAGGGAATAA TGCTGCTGCG TGAAGTGTTG AAGCAGGAAC CAACCAATGA ACTGGCTCTG
TTCAATTTGG GCTTACTGTC CATGCGGTCA AATCAGTACG AACGGGCTGT AGAGCGATTC
CGACAAATTT TGGTAAATAA CCCAACCAGT CGGAAAGCAC AGTTTTACCT GGGCATCAGT
TTAGCAGAAG CCGGTCAGAA AGCAGAAGCA AAGCAGGTAC TGGCTCAGGT AAAAAAGCAG
GAGAAAGACC CGCAAATTTT GGCAGCTGTT CAGGAGTACG AAGAGCGGCT AAAGTAA
 
Protein sequence
MKTTLMNKSV LFVIILASAL TVGLYSLPKV VVRNDSKQLS AASEGGHATQ TPTVAQSGAD 
SLNVTAKGNG ADASVIHEKP ISPEQQKRIR TLETEFASAG PAQKEPVGEK LIAIFRDLTR
YDSAAHYAGL VAMAQPNERN LLRAGDEHFE AYTFAVDDKK TAQLGQKTRE FYQQALAKNP
NLLSAKANMA MTYVNTDTPM QGIMLLREVL KQEPTNELAL FNLGLLSMRS NQYERAVERF
RQILVNNPTS RKAQFYLGIS LAEAGQKAEA KQVLAQVKKQ EKDPQILAAV QEYEERLK