Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5976 |
Symbol | |
ID | 8729757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7245644 |
End bp | 7246666 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | response regulator receiver protein |
Protein accession | YP_003390737 |
Protein GI | 284040807 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.638132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGAAA TTCAACTAAC GCGGGGCTTC CTAAGAAAAC CAACAAATAG CGTATTGATT CTGCTGAGCA TCGTATTGCT GATAGAGGCC CTGTCGTGGT CTATTGGTTA CGATATAAAA GCTCATAAGG TGCAAGAAGC TGGTGGTTAT TGGCACTATG TTAGCCTATT GCTACGTTCG CTGATTGTTC CTGAGCTGGT TACTCTTTTT ATTACCGTTA CCCTCATCAA CCATTTCCAT CATTGGTTTA AATTGAAGAA CATTTCCAAT GACTGGCGGT CTATCGGAAA TTACGAGTTA CAGTTCCTCC CCGTTTTACT AATCGCTTTC TGGGTATTTA ATCCGATTAC TCAAACAATA CGTTACCTCC TGGTCTTTTT CCCAAACTAT TCCATTAGTG GGTATTGGGA AAAATACATT GTTGAAACGT TCCGGTGGAA TGTATACTTC ACATATTTAT TTCCGATTCT GCTAATAGGT TATATCGCGC TTAACATCTC TCTCCTTCAA GATTATCTGA AGCAACGGCG GGAAGCACTG GAAGCTGCGG AGGCCGAAGC CGCTAAAGTG GCTCAGGAGG CTCTGGCTTT ATCGGCAACG TTTTCGCCAA AACCGATTGT CCCATCGCCT TATTTGTCTT ACCTGAAAGG GAAAAATTCG CTGGGTGAAT TGGATTTTCC GGTTAACGAT GTCTATTACT TTACTATTGA AGAACGATTT TACTACGCTG AGTTGGCCAA AGGGCGTTAC TTAATCAGTA AGACGCTAAA TGATCTGGAA GCGGAGCTGG ACCCCACCCA GTTCTTTCGT ATCAAACGTG ACTATATTGT TAACCGACAA GCGGTATTGA ATTACGCTTA TTGGGAAAAT GGTAAATACA TTGTTCGGCT CAACATTCTT GAAGGCCATG ATATAATTGT TCCACGGGCC CGAATGCAGG AATTCAGGGA GTGGCTTCAA AATAATCAGC GTCCTCTCTC CAGCACAGAC TCGTTGGAAA AAACGTTTAC AGATAGTTTT TGA
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Protein sequence | MKEIQLTRGF LRKPTNSVLI LLSIVLLIEA LSWSIGYDIK AHKVQEAGGY WHYVSLLLRS LIVPELVTLF ITVTLINHFH HWFKLKNISN DWRSIGNYEL QFLPVLLIAF WVFNPITQTI RYLLVFFPNY SISGYWEKYI VETFRWNVYF TYLFPILLIG YIALNISLLQ DYLKQRREAL EAAEAEAAKV AQEALALSAT FSPKPIVPSP YLSYLKGKNS LGELDFPVND VYYFTIEERF YYAELAKGRY LISKTLNDLE AELDPTQFFR IKRDYIVNRQ AVLNYAYWEN GKYIVRLNIL EGHDIIVPRA RMQEFREWLQ NNQRPLSSTD SLEKTFTDSF
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