Gene Slin_5976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5976 
Symbol 
ID8729757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7245644 
End bp7246666 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content43% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003390737 
Protein GI284040807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.638132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAAA TTCAACTAAC GCGGGGCTTC CTAAGAAAAC CAACAAATAG CGTATTGATT 
CTGCTGAGCA TCGTATTGCT GATAGAGGCC CTGTCGTGGT CTATTGGTTA CGATATAAAA
GCTCATAAGG TGCAAGAAGC TGGTGGTTAT TGGCACTATG TTAGCCTATT GCTACGTTCG
CTGATTGTTC CTGAGCTGGT TACTCTTTTT ATTACCGTTA CCCTCATCAA CCATTTCCAT
CATTGGTTTA AATTGAAGAA CATTTCCAAT GACTGGCGGT CTATCGGAAA TTACGAGTTA
CAGTTCCTCC CCGTTTTACT AATCGCTTTC TGGGTATTTA ATCCGATTAC TCAAACAATA
CGTTACCTCC TGGTCTTTTT CCCAAACTAT TCCATTAGTG GGTATTGGGA AAAATACATT
GTTGAAACGT TCCGGTGGAA TGTATACTTC ACATATTTAT TTCCGATTCT GCTAATAGGT
TATATCGCGC TTAACATCTC TCTCCTTCAA GATTATCTGA AGCAACGGCG GGAAGCACTG
GAAGCTGCGG AGGCCGAAGC CGCTAAAGTG GCTCAGGAGG CTCTGGCTTT ATCGGCAACG
TTTTCGCCAA AACCGATTGT CCCATCGCCT TATTTGTCTT ACCTGAAAGG GAAAAATTCG
CTGGGTGAAT TGGATTTTCC GGTTAACGAT GTCTATTACT TTACTATTGA AGAACGATTT
TACTACGCTG AGTTGGCCAA AGGGCGTTAC TTAATCAGTA AGACGCTAAA TGATCTGGAA
GCGGAGCTGG ACCCCACCCA GTTCTTTCGT ATCAAACGTG ACTATATTGT TAACCGACAA
GCGGTATTGA ATTACGCTTA TTGGGAAAAT GGTAAATACA TTGTTCGGCT CAACATTCTT
GAAGGCCATG ATATAATTGT TCCACGGGCC CGAATGCAGG AATTCAGGGA GTGGCTTCAA
AATAATCAGC GTCCTCTCTC CAGCACAGAC TCGTTGGAAA AAACGTTTAC AGATAGTTTT
TGA
 
Protein sequence
MKEIQLTRGF LRKPTNSVLI LLSIVLLIEA LSWSIGYDIK AHKVQEAGGY WHYVSLLLRS 
LIVPELVTLF ITVTLINHFH HWFKLKNISN DWRSIGNYEL QFLPVLLIAF WVFNPITQTI
RYLLVFFPNY SISGYWEKYI VETFRWNVYF TYLFPILLIG YIALNISLLQ DYLKQRREAL
EAAEAEAAKV AQEALALSAT FSPKPIVPSP YLSYLKGKNS LGELDFPVND VYYFTIEERF
YYAELAKGRY LISKTLNDLE AELDPTQFFR IKRDYIVNRQ AVLNYAYWEN GKYIVRLNIL
EGHDIIVPRA RMQEFREWLQ NNQRPLSSTD SLEKTFTDSF