Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5956 |
Symbol | |
ID | 8729737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7220712 |
End bp | 7221515 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_003390717 |
Protein GI | 284040787 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.377479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG CTATCGTGGG TTGCGGCAAT ATGGGTATGG CATTTGCCAA GTCATTTTTG CAGTACGATC TGGTAAAGAA GGAAAACTTA CTTCTTATTG AAAAAAGCGC AGACCGTTCT GAAGCGCTCA AAAATGAAAA AGCCGGTGTT GTTGTCGATA CAATTGGCCC GCACGTTGGC GACACAGATT TGATTATTCT ATCGGTTAAG CCGCAGGATT TCAACAGTGT ACACGAAGCC CTTCGGGAGG TTGTACAACC GCACCAAGTT ATCCTGTCGA TTATGGCAGG AATTCCAATC AATCAGATTC AGGAGAAGCT AGGGCATTCG CTCGTGGTTC GGGCCATGCC CAATACGCCC GCCATGCTGG GCATGGGGAT AACCGGTTTT ACTGCGGCCA AAGAAGTGGA TCTAACTAGC CTGCGCCGGG TCGAAAACCT GATCAACGCT ACCGGCCGGT CTATTTTTCT GGAAGACGAG TCGATGCTCG ATGCCGTTAC AGCACTAAGT GGCAGCGGTC CGGCTTATTT TTATTTCGTC GTGAAAGCGA TGATCGATGC CGGGAAACAA ATGGGTTTCG ACGATTCTGT TTCGGCCTTG CTGGTCAAAC AAACGATGCT TGGGGCCTAT CACCTCATTA ACACTGCTGA TAAATCGCTG GACGAACTCA TTAAAGCTGT AGCTTCCAAA GGGGGCACCA CAGAAGCGGC CCTGCGCGAG TTTGAGAGTG GTGGCCTGGC CAATACGCTT GTAGCAGGTA TCAAAGCCGC TCAGGTGCGG GCAACGGAGT TATCGAAAGA GTAG
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Protein sequence | MKIAIVGCGN MGMAFAKSFL QYDLVKKENL LLIEKSADRS EALKNEKAGV VVDTIGPHVG DTDLIILSVK PQDFNSVHEA LREVVQPHQV ILSIMAGIPI NQIQEKLGHS LVVRAMPNTP AMLGMGITGF TAAKEVDLTS LRRVENLINA TGRSIFLEDE SMLDAVTALS GSGPAYFYFV VKAMIDAGKQ MGFDDSVSAL LVKQTMLGAY HLINTADKSL DELIKAVASK GGTTEAALRE FESGGLANTL VAGIKAAQVR ATELSKE
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