Gene Slin_5956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5956 
Symbol 
ID8729737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7220712 
End bp7221515 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content50% 
IMG OID 
Productpyrroline-5-carboxylate reductase 
Protein accessionYP_003390717 
Protein GI284040787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.377479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CTATCGTGGG TTGCGGCAAT ATGGGTATGG CATTTGCCAA GTCATTTTTG 
CAGTACGATC TGGTAAAGAA GGAAAACTTA CTTCTTATTG AAAAAAGCGC AGACCGTTCT
GAAGCGCTCA AAAATGAAAA AGCCGGTGTT GTTGTCGATA CAATTGGCCC GCACGTTGGC
GACACAGATT TGATTATTCT ATCGGTTAAG CCGCAGGATT TCAACAGTGT ACACGAAGCC
CTTCGGGAGG TTGTACAACC GCACCAAGTT ATCCTGTCGA TTATGGCAGG AATTCCAATC
AATCAGATTC AGGAGAAGCT AGGGCATTCG CTCGTGGTTC GGGCCATGCC CAATACGCCC
GCCATGCTGG GCATGGGGAT AACCGGTTTT ACTGCGGCCA AAGAAGTGGA TCTAACTAGC
CTGCGCCGGG TCGAAAACCT GATCAACGCT ACCGGCCGGT CTATTTTTCT GGAAGACGAG
TCGATGCTCG ATGCCGTTAC AGCACTAAGT GGCAGCGGTC CGGCTTATTT TTATTTCGTC
GTGAAAGCGA TGATCGATGC CGGGAAACAA ATGGGTTTCG ACGATTCTGT TTCGGCCTTG
CTGGTCAAAC AAACGATGCT TGGGGCCTAT CACCTCATTA ACACTGCTGA TAAATCGCTG
GACGAACTCA TTAAAGCTGT AGCTTCCAAA GGGGGCACCA CAGAAGCGGC CCTGCGCGAG
TTTGAGAGTG GTGGCCTGGC CAATACGCTT GTAGCAGGTA TCAAAGCCGC TCAGGTGCGG
GCAACGGAGT TATCGAAAGA GTAG
 
Protein sequence
MKIAIVGCGN MGMAFAKSFL QYDLVKKENL LLIEKSADRS EALKNEKAGV VVDTIGPHVG 
DTDLIILSVK PQDFNSVHEA LREVVQPHQV ILSIMAGIPI NQIQEKLGHS LVVRAMPNTP
AMLGMGITGF TAAKEVDLTS LRRVENLINA TGRSIFLEDE SMLDAVTALS GSGPAYFYFV
VKAMIDAGKQ MGFDDSVSAL LVKQTMLGAY HLINTADKSL DELIKAVASK GGTTEAALRE
FESGGLANTL VAGIKAAQVR ATELSKE