Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5942 |
Symbol | |
ID | 8729723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7201301 |
End bp | 7202113 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Exonuclease RNase T and DNA polymerase III |
Protein accession | YP_003390703 |
Protein GI | 284040773 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCATC GACTTGTACT CAGAAAACCA CTCGCTTTTT TCGACCTCGA AACGACGGGT ATCAACATCG CCAAAGACCG TATCATTGAC ATCTGCATCA TCAAGGCATT GCCGGGCGGT GAGGTGATTA CCAAAAATCA GCGTGTTCAT CCGGGTATGC CCATTCCGCT GGAGTCGAGT CTGATTCACG GTATTTACGA CGACGATGTT CAGGATGCTC CTCCGTTTAA GACCGTTGCC CGGACGCTGG CGCAGTTTCT GGACGGGTGC GATCTGGCGG GCTTCAATTG CAATCGCTTC GACGTACCGC TGCTGGTCGA AGAGTTTTTG CGGGCCAATG TCGACTTCGA TATGAAAAAT CGTCGGCTGG TCGATGCTCA GCGTATTTTC CATCTCATGG AACCGCGAAA TCTGTCGGCA GCCTATAAAT TTTACTGCAA TAAAGATTTA GTGGGCGCCC ACGGTGCTGA GGCCGATACC ATTGCTACCC TCGAAGTGCT GGATGCGCAG GTGCAGCGGT ATATGGGCAT GGTCGCCAAA TCGGATAGCG GAGCGGATGT GGTATTCGAG AACGACGTTG ATATGCTACA TAGCCTCACC GCCAACAAAA ACATCGATCT TGCGGGTCGG ATGGTGATTA ATGAGAAGGG AGAGGAAGTA TTCAACTTCG GAAAGCACAA AGGAGCGCCC GTGCTGGAAG TGCTGAAGAA AGAACCGTCT TTTTACGACT GGATACTAAA AGGCGATTTC CCGCTCGATA CAAAACGCCG GTTGACCGAA ATCCGGCTTC GTATGTTCAG TAACGGAAAG TAA
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Protein sequence | MTHRLVLRKP LAFFDLETTG INIAKDRIID ICIIKALPGG EVITKNQRVH PGMPIPLESS LIHGIYDDDV QDAPPFKTVA RTLAQFLDGC DLAGFNCNRF DVPLLVEEFL RANVDFDMKN RRLVDAQRIF HLMEPRNLSA AYKFYCNKDL VGAHGAEADT IATLEVLDAQ VQRYMGMVAK SDSGADVVFE NDVDMLHSLT ANKNIDLAGR MVINEKGEEV FNFGKHKGAP VLEVLKKEPS FYDWILKGDF PLDTKRRLTE IRLRMFSNGK
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