Gene Slin_5942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5942 
Symbol 
ID8729723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7201301 
End bp7202113 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content51% 
IMG OID 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_003390703 
Protein GI284040773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCATC GACTTGTACT CAGAAAACCA CTCGCTTTTT TCGACCTCGA AACGACGGGT 
ATCAACATCG CCAAAGACCG TATCATTGAC ATCTGCATCA TCAAGGCATT GCCGGGCGGT
GAGGTGATTA CCAAAAATCA GCGTGTTCAT CCGGGTATGC CCATTCCGCT GGAGTCGAGT
CTGATTCACG GTATTTACGA CGACGATGTT CAGGATGCTC CTCCGTTTAA GACCGTTGCC
CGGACGCTGG CGCAGTTTCT GGACGGGTGC GATCTGGCGG GCTTCAATTG CAATCGCTTC
GACGTACCGC TGCTGGTCGA AGAGTTTTTG CGGGCCAATG TCGACTTCGA TATGAAAAAT
CGTCGGCTGG TCGATGCTCA GCGTATTTTC CATCTCATGG AACCGCGAAA TCTGTCGGCA
GCCTATAAAT TTTACTGCAA TAAAGATTTA GTGGGCGCCC ACGGTGCTGA GGCCGATACC
ATTGCTACCC TCGAAGTGCT GGATGCGCAG GTGCAGCGGT ATATGGGCAT GGTCGCCAAA
TCGGATAGCG GAGCGGATGT GGTATTCGAG AACGACGTTG ATATGCTACA TAGCCTCACC
GCCAACAAAA ACATCGATCT TGCGGGTCGG ATGGTGATTA ATGAGAAGGG AGAGGAAGTA
TTCAACTTCG GAAAGCACAA AGGAGCGCCC GTGCTGGAAG TGCTGAAGAA AGAACCGTCT
TTTTACGACT GGATACTAAA AGGCGATTTC CCGCTCGATA CAAAACGCCG GTTGACCGAA
ATCCGGCTTC GTATGTTCAG TAACGGAAAG TAA
 
Protein sequence
MTHRLVLRKP LAFFDLETTG INIAKDRIID ICIIKALPGG EVITKNQRVH PGMPIPLESS 
LIHGIYDDDV QDAPPFKTVA RTLAQFLDGC DLAGFNCNRF DVPLLVEEFL RANVDFDMKN
RRLVDAQRIF HLMEPRNLSA AYKFYCNKDL VGAHGAEADT IATLEVLDAQ VQRYMGMVAK
SDSGADVVFE NDVDMLHSLT ANKNIDLAGR MVINEKGEEV FNFGKHKGAP VLEVLKKEPS
FYDWILKGDF PLDTKRRLTE IRLRMFSNGK