Gene Slin_5928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5928 
Symbol 
ID8729709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7183034 
End bp7183516 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content50% 
IMG OID 
ProductGAF domain-containing protein 
Protein accessionYP_003390689 
Protein GI284040759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CACTTATTCT CCCCCAAACT TCCGATCGGC AGGCTATTTA CGATAGTCTG 
ATTCCGCAGA TAGCTGCTCT TGTTGAGGGC GAACCCGACC TGATCGCCAA CCTGGCCAAT
ATTACCGCTG CGCTCAAAGA AGCCTTTGGC TTTTTCTGGG TTGGGTTTTA TCTCAAAAAA
GAAAATCAAT TGGTACTGGG ACCGTTTCAG GGTCCTATCG CCTGTACGCG CATTGCCTTC
GATAAAGGTG TTTGCGGAGC AGCTTATACA CGTCAGGAAA CGATTCTGGT GCCCGACGTT
GATCAGTTTC CGGGACATAT TGCCTGTAGC TCGGCGTCAA AGTCGGAAGT CGTAGTACCG
GTATTTGATC GGGATGGCAA CGTAACGATG GTGCTGGACG TCGATAGTGA TCAGCTGAAC
GATTTCAGCG AGGTCGATGC TAAGGAACTG GAGAAGATTG CGGGCCTGAT CATGACGTTC
TAA
 
Protein sequence
MAETLILPQT SDRQAIYDSL IPQIAALVEG EPDLIANLAN ITAALKEAFG FFWVGFYLKK 
ENQLVLGPFQ GPIACTRIAF DKGVCGAAYT RQETILVPDV DQFPGHIACS SASKSEVVVP
VFDRDGNVTM VLDVDSDQLN DFSEVDAKEL EKIAGLIMTF