Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5903 |
Symbol | |
ID | 8729684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7154844 |
End bp | 7155779 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | methionine sulfoxide reductase A |
Protein accession | YP_003390665 |
Protein GI | 284040735 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.964047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.547889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTTG GGAAAACAAT CAAGATATTT CTCATAGACG GCGATCCAAA TGGACGCATG ACATGTGAAT TGTCGAACTG GACCGGCAAG GCTTACAAAG TTCCTAGGAT AAAGGTTAAA GACTGCTCTG ACAGATCAGA CCTTTTTAAC ACCGGCATTT ATCTTTTGCT AGGCAAAGAC GAGGAAGGCC AAGACCAAGT ATATATAGGC GAAGCTGAGA CAATACTCAA GAGACTGAAT CAACATCTCA CCCAGAAAGA CTTTTGGAAT GAAGCGGTCA TCTTTGTAAG CAAGGATGAA AACCTCAATA AAGCACACAT AAAATATTTG GAAAGTAGGC TTTATGAGAT AGCGAAGACT GCAAATAGAT ATAAGATCGC AAATACAGTA ACGCCTACGC AATCTTCTAT TTCAGAATCA GACCGGGCAG AAATGGAAGA GTTTTTAGAA AATGCCAAAC TGCTTGTTAA CACCCTCGGC CATAAAGTAT TCGAAGAAAA ACGTGAACTG AAAGCAAGAG TCAAGCAACA AGAGTTCTTC ATGATTGTTG CACCTCGTGG CGCGAACGCA CAAGGGGAGC CTACTTCTGA GGGTTTTGTT GTATTAAAAG GTTCAAAGAT TGCCACTTCC ACCGTTACGT CTTTTCCTCC GTCGATGCAA AAGCTTCGAC AAGATCTTAT CGATAAAAAG GTAGTAGTTC AAAACGGCGA ACACTTGGAA CTAACGGACG ATTATATTTT TGCAAGTCCT TCAACAGCAG CAGCAATTGT TATGGGCCGC AATGCTAATG GCCTAATTGA ATGGAAGTTG CCAAATGGTC GGACGCTGAA AGGAGTCGAA TCAGAGGTCG AAACAACGCC AGCTAACATG GGGTTGCCAA AAGTGGGACT TGAGCTTGAC AACGTCGATG ATACTATTAA TCAAATTGTG AACTAA
|
Protein sequence | MKFGKTIKIF LIDGDPNGRM TCELSNWTGK AYKVPRIKVK DCSDRSDLFN TGIYLLLGKD EEGQDQVYIG EAETILKRLN QHLTQKDFWN EAVIFVSKDE NLNKAHIKYL ESRLYEIAKT ANRYKIANTV TPTQSSISES DRAEMEEFLE NAKLLVNTLG HKVFEEKREL KARVKQQEFF MIVAPRGANA QGEPTSEGFV VLKGSKIATS TVTSFPPSMQ KLRQDLIDKK VVVQNGEHLE LTDDYIFASP STAAAIVMGR NANGLIEWKL PNGRTLKGVE SEVETTPANM GLPKVGLELD NVDDTINQIV N
|
| |