Gene Slin_5903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5903 
Symbol 
ID8729684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7154844 
End bp7155779 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content42% 
IMG OID 
Productmethionine sulfoxide reductase A 
Protein accessionYP_003390665 
Protein GI284040735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.964047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.547889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTG GGAAAACAAT CAAGATATTT CTCATAGACG GCGATCCAAA TGGACGCATG 
ACATGTGAAT TGTCGAACTG GACCGGCAAG GCTTACAAAG TTCCTAGGAT AAAGGTTAAA
GACTGCTCTG ACAGATCAGA CCTTTTTAAC ACCGGCATTT ATCTTTTGCT AGGCAAAGAC
GAGGAAGGCC AAGACCAAGT ATATATAGGC GAAGCTGAGA CAATACTCAA GAGACTGAAT
CAACATCTCA CCCAGAAAGA CTTTTGGAAT GAAGCGGTCA TCTTTGTAAG CAAGGATGAA
AACCTCAATA AAGCACACAT AAAATATTTG GAAAGTAGGC TTTATGAGAT AGCGAAGACT
GCAAATAGAT ATAAGATCGC AAATACAGTA ACGCCTACGC AATCTTCTAT TTCAGAATCA
GACCGGGCAG AAATGGAAGA GTTTTTAGAA AATGCCAAAC TGCTTGTTAA CACCCTCGGC
CATAAAGTAT TCGAAGAAAA ACGTGAACTG AAAGCAAGAG TCAAGCAACA AGAGTTCTTC
ATGATTGTTG CACCTCGTGG CGCGAACGCA CAAGGGGAGC CTACTTCTGA GGGTTTTGTT
GTATTAAAAG GTTCAAAGAT TGCCACTTCC ACCGTTACGT CTTTTCCTCC GTCGATGCAA
AAGCTTCGAC AAGATCTTAT CGATAAAAAG GTAGTAGTTC AAAACGGCGA ACACTTGGAA
CTAACGGACG ATTATATTTT TGCAAGTCCT TCAACAGCAG CAGCAATTGT TATGGGCCGC
AATGCTAATG GCCTAATTGA ATGGAAGTTG CCAAATGGTC GGACGCTGAA AGGAGTCGAA
TCAGAGGTCG AAACAACGCC AGCTAACATG GGGTTGCCAA AAGTGGGACT TGAGCTTGAC
AACGTCGATG ATACTATTAA TCAAATTGTG AACTAA
 
Protein sequence
MKFGKTIKIF LIDGDPNGRM TCELSNWTGK AYKVPRIKVK DCSDRSDLFN TGIYLLLGKD 
EEGQDQVYIG EAETILKRLN QHLTQKDFWN EAVIFVSKDE NLNKAHIKYL ESRLYEIAKT
ANRYKIANTV TPTQSSISES DRAEMEEFLE NAKLLVNTLG HKVFEEKREL KARVKQQEFF
MIVAPRGANA QGEPTSEGFV VLKGSKIATS TVTSFPPSMQ KLRQDLIDKK VVVQNGEHLE
LTDDYIFASP STAAAIVMGR NANGLIEWKL PNGRTLKGVE SEVETTPANM GLPKVGLELD
NVDDTINQIV N