| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5878 |
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| Symbol | |
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| ID | 8729654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7120095 |
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| End bp | 7121579 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | peptidase S41 |
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| Protein accession | YP_003390641 |
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| Protein GI | 284040711 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.304835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTAT TACTAGTTTG GCGTCCGGCC CTGCTTTTAG CGGTTTCGGC TACTGTTTTT
CTTACGTCCT GTAAAAAAAC TGAAGAGGTG TCGGTTGCAC CCAGTAATGT ATCATCAACA
ACAGCCGCAA CTGGCGCTGT AACGGATACG GAGGTAAATG ACTGGATTTT GCAGAACATG
CAGACCTATT ACTTCTGGAA CGATAAAATC CCGGCAAATC CCAATAAATC GCTCAGTCCG
GACCAGTTTT TTACCTCCCT TCTGAACACC TATAATGCTA CAAGTAATGC TGATGGCGAC
CGTTTTTCGT GGATTCAGGC GAGTGCCGAA ACGTTGAAGG CTTCGCTGAG TGGACAGTCG
AAGACAACGG GTATGCAATA CAAGTTGTAC TACCGAGACA ATACCAAGAC CACGGTTATT
GCGTCGGTGC TGTATGTGTT GCCGGACTCA CCCGCTGCCA GGGCAGGGAT TAAACGCGGT
GATGTTATCT CAAAAGTGAA TGGGCAAACC CTGACGGGGA CCAACTATTC CGAACTGCTG
TCGGGGAGTG GTTCGGATAC CTACACATAT GGCTTTGCTA CGGTAGCCGC TAATGGCTCA
GTAACCGATA CCGATCAGAC CAAACAGGTA ACCGCTATTG TTTTTCAGGA AGACCCTGTT
TTTCTGGATA CGACATACAC CGTCAATGGC AAAACGATAG GGTATGTTGT TTATAATCAG
TTTATTCCCG GCGTTTACAA GTCAGATGGT ACAACTGACA AGACGTATGA CCTGAAACTG
GATAATATTT TCGGCAAGTT CAGGCAGAAA GGTGTCAATG AGTTGGTGCT CGATCTGCGC
TATAATCGAG GAGGGTATGT AAGTTCTGCT GTTAATCTGG CTAGTTCGAT CGGTAAGAAC
ATAGATGCAT CCAAAGTATT TTATTCTCAG AAGTGGAATC CTACTGCAGC GGCTGCCTAT
GCCGCCAAGT ACGGGGCCAA CTGGAACATT CAAAACTTCG TAACAAAATC CACTAATATC
GGCGCTAATC TGAGCCGCGT TTTCGTCCTG ACAACGAACA GCACCGCTTC GGCCAGTGAG
TTGATCATCA ACGGATTACG GCCATTTATG ACTGTGACGA CCATTGGTAC AACCACTGTT
GGTAAAAACG TTGGGTCCAT TACGATTTCG GACAATACGG GTCGTATCAA ATGGGGTATT
CAACCCATTA CTTTCAAATC GGCCAATGCA CAGGGCTTTA CCGAGTACGG CAGCGGATTT
ACTCCGTCGG TTGAGGTGAA GGAGCCAACC ATAGCGATGA AACCCTTTGG CGATTTAAGC
GAGCCCATGC TGAGCGAAGC TGTTTTTCAG ATCACTGGGG TACGAGCTGC CCGCCGGGCG
GCTTCTGTAG AAATTGACCG ACCTTTCATC GGATCATCTC TCGACGAAAA AGCTGGTGGG
GGAAACATGT ACGTCAACGA TACACCACTG GGACGAATAC ATTAA
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| Protein sequence | MKVLLVWRPA LLLAVSATVF LTSCKKTEEV SVAPSNVSST TAATGAVTDT EVNDWILQNM
QTYYFWNDKI PANPNKSLSP DQFFTSLLNT YNATSNADGD RFSWIQASAE TLKASLSGQS
KTTGMQYKLY YRDNTKTTVI ASVLYVLPDS PAARAGIKRG DVISKVNGQT LTGTNYSELL
SGSGSDTYTY GFATVAANGS VTDTDQTKQV TAIVFQEDPV FLDTTYTVNG KTIGYVVYNQ
FIPGVYKSDG TTDKTYDLKL DNIFGKFRQK GVNELVLDLR YNRGGYVSSA VNLASSIGKN
IDASKVFYSQ KWNPTAAAAY AAKYGANWNI QNFVTKSTNI GANLSRVFVL TTNSTASASE
LIINGLRPFM TVTTIGTTTV GKNVGSITIS DNTGRIKWGI QPITFKSANA QGFTEYGSGF
TPSVEVKEPT IAMKPFGDLS EPMLSEAVFQ ITGVRAARRA ASVEIDRPFI GSSLDEKAGG
GNMYVNDTPL GRIH
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