Gene Slin_5805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5805 
Symbol 
ID8729580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7048593 
End bp7049123 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390569 
Protein GI284040639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.053311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.533619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTA GAGAAGCCTT ACAACAGGCA GCCTTAATGA TGGGGGTTAT GCTATCGGCT 
CCCACGCTGG CGGGCGCAAT GGGTCGTGTG ACGAACACGG GTCCAAGCGT AGCCGTCTCG
CCCGACCAGG AAGCCCTGCT GGCCGAAGTA GCCGATGTGA TCATCCCAAA CACCAGTACG
CCGGGCGCTA AAGCCGCCGG TGCCGAAAAA TTCATTGTCC GCGTCATGCG CGACTGTTAC
CCCAAAGCCG ATCAGGAGAA ATTCTACGCG GGGCTGGCCA AATTGGATGC CGACAGCAAA
ACCAAATTTG GCAAAGGCTT CGCTGCGCTG GAAAACGCTC AGAAAATTGA TATGGTGAAA
CAGACCATGA CGGAAGACAA ACCGTTTTTC CTGCGGATGA AAGAACTAAC CACCACCGGC
TATTTCACCT CCGAAATTGG TGCAACCAAA GCCCTCGAAT ACCTGCCCGT TCCGGGCCAG
TTCAACGGCT GTATGCCCAT GAAACCCGGC CAGAAGGCGT GGGCTATATA A
 
Protein sequence
MQRREALQQA ALMMGVMLSA PTLAGAMGRV TNTGPSVAVS PDQEALLAEV ADVIIPNTST 
PGAKAAGAEK FIVRVMRDCY PKADQEKFYA GLAKLDADSK TKFGKGFAAL ENAQKIDMVK
QTMTEDKPFF LRMKELTTTG YFTSEIGATK ALEYLPVPGQ FNGCMPMKPG QKAWAI