| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5798 |
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| Symbol | |
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| ID | 8729573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7038075 |
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| End bp | 7041683 |
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| Gene Length | 3609 bp |
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| Protein Length | 1202 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003390562 |
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| Protein GI | 284040632 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.887115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.170321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAA GGCTGCTCAA AATTATGCGA GTCAGTTTCT ACCTGTTTTT CGTGGTAACC
GCCTTCGCCA CGATCGCACA GGCGCACGAC ACGTATGGTC AGGAATTACT CAACAAACGC
GTTAGCCTCC AGCTCTCGAA CCTGACCGTT GAACAGGCAA TCAGTCGCAT CGGTAAAGAA
GCCGATGTGA AGTTCATGTA TAATCCGCGC ATCTTCAGCC AGCAGCGCAT CAGCTCGCTG
ACGTTTACCA ACGAGAAGCT GTCGGCGGTG CTCGACGTAG TACTCAGTCC TGCGTCTATT
GATTATGAAG TAGGTGGCAA AACCATCATC CTGAAACGGG CCGCTACGGC TACCAGCACG
ACAGCAAGCC CAAACGTCGA AAAACCCGTT CCGCCAATTA CCGTCACGGG CCGGGTTCTC
GATGAAAAAG GCGCTGGTCT GCCCGGTGCG ACGGTTCTGC TCAAAGGAAC TACCAATGTC
GGTACAGCCA CGGACGCCGA GGGTCGTTTT TCCCTGAACG TACCCGACGG TAATGGAACA
CTTGTTATCT CATCCATCAG CTACACCGCG CAGGAAGTAG CCATCAACAA CCGGACAACC
TTGCCCGACA TTCAACTGGC ATCGGATGTA AAATCACTGA GCGAGGTGGT AGTTGTGGGC
TATGGTACCC AGCGCAAGAA AGATTTGACC GGCGCTGTGG CGGTCGTAAA CGTGGCCGAG
CTTCAGCAAC AGCCCACGTC GCAGATCACC AACCAGTTGC AGGGCCGGGC GTCGGGCGTT
ACGGTGCTGG GTTCGGGACA GCCGGGTGAA GCGCCCCAGG TGCGTATCCG GGGATTGAAT
ACGTTCGGAA ACAACCAGCC GCTGTATGTT GTGGATGGCG TACCGACGCA GAACATCAAC
GACATCAACC CGAACGACGT GGCCTCCATG CAGGTTTTGA AAGATGCCGG TTCGGCGTCG
ATCTATGGCT CACGGGCCGC CAACGGGGTA ATTATTATCA CGACCCGCCG GGGTACGGGA
AAGGTAAAAG TGCAGTACGA TGCCTATTAC GGAACGCAGA TTCCTAAAGG CGGCAATGTG
TGGGATTTGC TGAATCCGCA AGAAACGGCT CAATTGAAGT TCAATGCCCT TCGCAACGCC
AACCCCAATG TGGCCATTAA CGATCCGCTG TACGGCAGCG GCACCACGCC CGTTTTGCCG
GACTATATCG CGCCACAGGG AGCCAAAGAA GGCGACCCAT CGGTAGACCC ATCGCGGTAC
AATGTTAACC CGACCTACAA CGATGCCTCG CAGTACAATG CCTTCTACCG GATTACCCGG
GCGAATAAGA CCGGAACGGA TTGGTTCCAT GAGATTTTCA AGGCGGCTCC CATCACCAGC
CATAACCTGG CCGTAAGCGG TGGCGGTCCG CAGGGCAACT ATCTGTTCTC GTTCAACTAC
TTCAATCAGC AGGGTACACT CATCAACACG TACCTGAAGC GGTACACAAT CCGGTCGAAC
AGCCAGTACA ACATTCGGGA GAACATACGG GTAGGTGAAA ACCTGGCCTT CTCGGTGTCG
GACAACCCAC GGGTAAACGC CCTTCAGGAA GGCAGCGCCA TTGGTATGGC GTTCCGCGAG
CAGCCCATTA TTCCGGTCTA TGACATTGCC GGAAACTATG CCGGGGGTTA CGGCCAGGGG
TTGGGTAACG CCAACAACCC GGTTGCCATT CAGAAACGGA CGGCCAACAA CCGGGGGCAG
AACAACCGGT TGTTCGGGAA CATGTACGCA GAGATCGACT TCCTGAAAGA TTTCACAGCC
CGCACCAGTT TCGGGGGTGA GATTTACATG GGTAACTTCC ATTCGTTTAC GTATCCAACC
TACGAAAACC AGGAGAACAC GACGACCAAC TCCTACACGG AGAACACCTT CAACGGGTCT
AACTGGACCT GGACCAACAC GGTACAGTAC CAGCACAACT TCAACAATAC GCACGATCTG
AAAGTACTGG TGGGCACTGA AGCGTACCAG AATCAGGGCC GTAACGTAGG GGGTACAACG
CAGGGATACT TCTCATTCGA TCCCAACTTC ACGAACCTCT CGACCGGTTC GGGAACGCCA
ACCAACTACA GCAATCGCTA TGCCGACGCG CTGTTCTCCC TGATTGGCCG GGTCGATTAC
TCGCTGAAAG ATAAGTACCT GTTGGGTGCT ACCATTCGTC GCGATGGCTC ATCCCGCTTC
CTGAACTACC AGTACGGCTG GTTCCCGGCG GTGAGTGCAG GCTGGCGCGT GTCGCAGGAG
AGCTTCATGA GCGGACTTAC CTGGCTGAAT GACCTGAAAA TTCGCGGGGG TTACGGTATC
ATGGGCAACC AGCTGAACGT TGATCCGGCC AACGCCTACA CAACCTACGG TGGTGATCGT
ACCTCGTCGT ACTACGCCAT TACCGGCTCT AACTCGGCTA ATTCGCTGGG CTTCCAGCGG
ACACGCATCG GTAACCCTGA CGCGCGCTGG GAGAAAAACA TCAACGCCAA CATTGGTTTC
GATGCCAGTC TGTGGAAAGG CAAACTGGAC CTGACGGTTG ATTATTACAA CAAAGAAGTT
CGTGATCTGC TGTACACCCT CGAACTGGCC GGAACGGCGG GTCTGGGAAC GGCTCCGGCG
GTCAATGTCG CCCGGATGCG CAACCACGGC CTCGACATTG CCGCGTCCAG CGCCATCAAC
GTGACCAACG ACCTGAAACT GACCGGTACG CTGACGTTTA CGACCTACAA CAACAAAATC
GTATCGCTGG CTGAGGGCGT CGATTATTTT GATCAGGAAG GTCGCCGGTT CAATGGTAGC
TACATTGTTC GCAACTCCGT TGGTCACTCA ATTGGGCAGT TCTTCGGCTA CAAAACCGCA
GGCTTCTGGA ATTCGCAGGA AGAGATCAAC CAGGCCAACG CTCAGGCTCA ACAGGCAACC
GGTAATTCGG CAGCCGTTTA CCAGAGCGAT GTGGCCGTGG GTCGTTTCCG CTATGCCGAC
GTGAATGGAG ATGGTCAGAT TACCGATGCC GACCGGACGT ACCTGGGCAA CCCGAATCCA
AAGTTCAGCT ACGGCCTGAA CCTGGGTGCC ACGTATAAAA AGTTCGACTT CAGCATTTTC
TTCTACGGAA CACAAGGCAA CGACATCTGG AACAACGTAC GCTGGTGGAC CGACTTCAAC
GCCAACTTCC AGGGAGCCAA AAGCCGGACG GCCCTGTACG ATTCCTGGAC ACCCGAAAAT
CACAATGCCA AAGCACCGAT TCAGGAAACG GTAGGCTCGT TCAGTTCGGC CAACGTACCT
AACTCGTACT TCGTGGAGAA TGGCTCGTAC CTGCGCGCCA AAAACGCGCA GCTTGGCTAT
ACCCTGCCCG CCAATACCCT GAAAAAGCTG GGTATCGAGC GGCTACGGGT ATATGTTCAG
TCGGCCAACC TGTTTACGAT CACCAAGTAC TCGGGTCTTG ATCCTGAAAT TGGCACTACG
GCCAACACGA ACAACAGCTC GGGTGGCAGT CTGAACCAAT CGTTCTCGAA TAGTACCTCG
TTTGGTATCG ACGAGGGTGT TTATCCGAAC CAGCGCCAGT TCCTCTTCGG TCTGAATGTG
ACGTTCTAA
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| Protein sequence | MQQRLLKIMR VSFYLFFVVT AFATIAQAHD TYGQELLNKR VSLQLSNLTV EQAISRIGKE
ADVKFMYNPR IFSQQRISSL TFTNEKLSAV LDVVLSPASI DYEVGGKTII LKRAATATST
TASPNVEKPV PPITVTGRVL DEKGAGLPGA TVLLKGTTNV GTATDAEGRF SLNVPDGNGT
LVISSISYTA QEVAINNRTT LPDIQLASDV KSLSEVVVVG YGTQRKKDLT GAVAVVNVAE
LQQQPTSQIT NQLQGRASGV TVLGSGQPGE APQVRIRGLN TFGNNQPLYV VDGVPTQNIN
DINPNDVASM QVLKDAGSAS IYGSRAANGV IIITTRRGTG KVKVQYDAYY GTQIPKGGNV
WDLLNPQETA QLKFNALRNA NPNVAINDPL YGSGTTPVLP DYIAPQGAKE GDPSVDPSRY
NVNPTYNDAS QYNAFYRITR ANKTGTDWFH EIFKAAPITS HNLAVSGGGP QGNYLFSFNY
FNQQGTLINT YLKRYTIRSN SQYNIRENIR VGENLAFSVS DNPRVNALQE GSAIGMAFRE
QPIIPVYDIA GNYAGGYGQG LGNANNPVAI QKRTANNRGQ NNRLFGNMYA EIDFLKDFTA
RTSFGGEIYM GNFHSFTYPT YENQENTTTN SYTENTFNGS NWTWTNTVQY QHNFNNTHDL
KVLVGTEAYQ NQGRNVGGTT QGYFSFDPNF TNLSTGSGTP TNYSNRYADA LFSLIGRVDY
SLKDKYLLGA TIRRDGSSRF LNYQYGWFPA VSAGWRVSQE SFMSGLTWLN DLKIRGGYGI
MGNQLNVDPA NAYTTYGGDR TSSYYAITGS NSANSLGFQR TRIGNPDARW EKNINANIGF
DASLWKGKLD LTVDYYNKEV RDLLYTLELA GTAGLGTAPA VNVARMRNHG LDIAASSAIN
VTNDLKLTGT LTFTTYNNKI VSLAEGVDYF DQEGRRFNGS YIVRNSVGHS IGQFFGYKTA
GFWNSQEEIN QANAQAQQAT GNSAAVYQSD VAVGRFRYAD VNGDGQITDA DRTYLGNPNP
KFSYGLNLGA TYKKFDFSIF FYGTQGNDIW NNVRWWTDFN ANFQGAKSRT ALYDSWTPEN
HNAKAPIQET VGSFSSANVP NSYFVENGSY LRAKNAQLGY TLPANTLKKL GIERLRVYVQ
SANLFTITKY SGLDPEIGTT ANTNNSSGGS LNQSFSNSTS FGIDEGVYPN QRQFLFGLNV
TF
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