Gene Slin_5794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5794 
Symbol 
ID8729569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7032653 
End bp7033708 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390558 
Protein GI284040628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0956926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACC AACCAACGAA AGGAATCCTG CTTGGCTTGC TGGCCTTAAG CCTCTGGAAC 
TGTAAAACCT CCGATCCAGA GCCAACGCCG TATGAGTCGG GTGTGCTTAT ATTGAATGCC
GGTAATTTCT TCCAGAATAA CGGTACGATT TCGTTTCTTC CACGGACGGG AAACACAGTC
GCCACTAACA TTTTTCAAGC CGCAAATCCA TCTCTAGCCC TTACTGGTGG TGTGCAGGGC
TATACCGAAG TGAATGGCAA AGGTCTGATT CTGGTCGATA ACAGCACCGC TGGTCAGGAT
AAGGTTGAAA TTGTCGAGTA TAACACATTT AAGTCACGCG CTACCCTGAA AACGCCGGAT
ATTGAAAACC CACGTCAGGT TATCCCCGCA GGCCCCAACA AGGCATATGT TAGTTGCTGG
GACGTTTCCG GCGATTTCAA TGCCGGTACG TTCTATAAAG ACCCCGGTTA TATAGCCGTC
GTTGACTTAA ACACCAATAC AGTCGTTAAA AAAATACCGG CGGTCAAAGG TGTTGAAAAT
ATGGTCGTTG CCGGAACGGA AGTGTTTGTG GGCAGCGGCA GTTATACTGG CAGCAAGACA
TTATTGATCA TTGACCTGAA CACCGATACG GAGAAACAAC GGATTGACTT TGGCGCAACG
CCCGAGCCCA TTGCAGTCGA TGCAACCGGG AAGCTGTGGA TACAGGCGGG TAATGATCTG
GTACAGATCG ACCCGGCAAC CCGGCTTGTT GCCAAACGGT GGACCTTTCC GACCAGACCC
GGTTCCGTTA CGATCAGCGC CGACAAACGG ACGTTTTACT ACACACAGAG TGGAAAAACC
TATCGGATAG GCGTCGACGC AAATGCCGCA TTAGGTAGCC AGGTAATAGG CCGTTCGTTC
ACTGCGCTGG GTATCGACCC GCAAACCAAA CGAATTTACG GAAGTGTAAC TCCATCGCAG
GCACAGACGG GGTACGTACT TCGCTTTGAA GAGAGTGGTG CCCTGATTGA CTCCGTCAGA
GCGGAAATTG CCCCTTCCGG GTTTTATTTC CGATGA
 
Protein sequence
MNYQPTKGIL LGLLALSLWN CKTSDPEPTP YESGVLILNA GNFFQNNGTI SFLPRTGNTV 
ATNIFQAANP SLALTGGVQG YTEVNGKGLI LVDNSTAGQD KVEIVEYNTF KSRATLKTPD
IENPRQVIPA GPNKAYVSCW DVSGDFNAGT FYKDPGYIAV VDLNTNTVVK KIPAVKGVEN
MVVAGTEVFV GSGSYTGSKT LLIIDLNTDT EKQRIDFGAT PEPIAVDATG KLWIQAGNDL
VQIDPATRLV AKRWTFPTRP GSVTISADKR TFYYTQSGKT YRIGVDANAA LGSQVIGRSF
TALGIDPQTK RIYGSVTPSQ AQTGYVLRFE ESGALIDSVR AEIAPSGFYF R