| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5793 |
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| Symbol | |
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| ID | 8729568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7030776 |
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| End bp | 7032656 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003390557 |
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| Protein GI | 284040627 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.128664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTATA ACGGATATGG GCAAACGGAT TCGTCGGTTG TGTCCTTATC GGCAGTGACC
GTTCGGGCCA TCGCGCCCGA ACGGTTTCTG GCCGGGCAGA AGCTCCAGCG CATCGACTCG
GCCACCCTGC TTCAGTTTCG CTTTGGTTCG CTGACCGATC TGCTGGCGTT GAACACGCCG
ATGGCCTTTA AGAATTACGG ACCGGGTCAG TTGGCTACGG TGGCTTTTCG GGGTACATCG
GCCAGTCATA CTGCCGTTCT CTGGAACGGC ATCAACATCA ACCAGCCGAA TCTGGGCCTG
ACGGATTTTT CGACTCTGCC CGTAGCGGGT TTCGACCGGC TGACGGTGCA ATACGGCTCG
TCGGCAAGCG TAGTTGGCTC TGATGCCGTG GGCGGTAGTA TTCTGCTGGG TAGTAATGCC
GTTTGGAAGC CGGGTGTTCA AGTGACACTG GGTCAGCAAC TCGCCAGTTT CCAGAATAAC
CAGACGCAAC TGGGCGTTCG CTACAGTATG GCTCTGGGGG CTGACTGGAA ACTATCGGGC
AAGACATTTG CCTATCGAAA CCAATTCAAC AATGCCTATC CATCGGCCGA ACGCCGGAAT
TATTTTCTGG AGCAGTCTAC CACCGCACAG CGGGGTCTGG TTCAAGATCT ATATTTCATG
CACAAAAGCG GACGGCAACT GTCAGTGAAT GTGTGGCTGA CCGACAACGA CCTGATCCTG
TCGCCGAAGG ATACCATCGC CCGGGAGCGT ACTCGGACGC AATCGGCGCG TTTTCTCACA
ACGTACGAAA CGAACCATTT AACGCTCCGG TTGGGCTGGA TTCATGACGT ACTTGATTAC
GCCAAGGGTA ATTTTGATCT GCCAAGCCAT ACCGAAACCG ATCGGTTTAT CAGCCGTGTC
GAGCGGGAGT TTGTATTAAC GCCCGTTACG GCTCATGTTG CCTTAAATCT GCGCATTGGT
GGCGAGTGGT CGCACTACCG CACCCGGACG GATGGGTATG TCCGGCCGCT GATTGAGGAA
GATCGGGGGG ATGTCTATGC GTTACTGCGA CTGCAAACGG CTCGCTGGCT GGTATCGGCC
AATCTGCGCC AGGCATTCGT TACTCATTTC AATCCGCCCC TCACACCGTC GTTGGGGGCT
GAATACCGGT TGGTACAACA TACTAAGTTC GGCCTGACAG CTAAAACCGC CATTAGTCGC
AGCTATCGGG TGCCAACCCT CAACGAACGA TACTGGGCCG ATTTGGGCAA TCCGAATCTG
TTGCCCGAAA ACGGGTTCAA TATAGAGGCC GGACTAGCGT CGACGCTGGC TATTCATGAA
CATCTTACGT TAACCTCCGA AGCGACTGTC TATCGCAATC GGGTGGATAA CTGGACGTAC
TGGAATCCAA CCACTAATTA TCACGTCGAG AATCTGCAAC TGGTTGTTGC CCGTGGGGGC
GAGTTGACCA TTAATCTGGC GTATGCGCGT GACAGTTGGC GGGCGGGCCT CCGGGCGGGA
TATGCCCTGA CGCGTTCCTC GCAGGAGCGG GCGTATGATG CCTACTCGCA GGATGTGATC
GGCAAGCAGC TGGTTTATGT GCCGCTGCAT ACCGAAACCC TCAACGCGTA TGTGCAGCGG
GGCCAAACCC GGCTGACGGT GCAAACTCAG GTCAATTCCC GGCGGTACAT CACGTTCGAC
AATAGCCAGT TTTTCAAGGG GGCAACGCTA ACGAATGTGT TGCTGGAAAC AACCGCTAAA
ATCGGTCCGG TGCCGGTTCG GGTGCAGGGC CAGGTCAATA ATGTATTCGA TGCGCTGATG
TTCAGCGTAA AACGGAACGC CTTGCCGGGA CGCAACTGGG CACTTAATCT GCTTATCAAT
TTACCAAATA ATACCCAATG A
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| Protein sequence | MAYNGYGQTD SSVVSLSAVT VRAIAPERFL AGQKLQRIDS ATLLQFRFGS LTDLLALNTP
MAFKNYGPGQ LATVAFRGTS ASHTAVLWNG ININQPNLGL TDFSTLPVAG FDRLTVQYGS
SASVVGSDAV GGSILLGSNA VWKPGVQVTL GQQLASFQNN QTQLGVRYSM ALGADWKLSG
KTFAYRNQFN NAYPSAERRN YFLEQSTTAQ RGLVQDLYFM HKSGRQLSVN VWLTDNDLIL
SPKDTIARER TRTQSARFLT TYETNHLTLR LGWIHDVLDY AKGNFDLPSH TETDRFISRV
EREFVLTPVT AHVALNLRIG GEWSHYRTRT DGYVRPLIEE DRGDVYALLR LQTARWLVSA
NLRQAFVTHF NPPLTPSLGA EYRLVQHTKF GLTAKTAISR SYRVPTLNER YWADLGNPNL
LPENGFNIEA GLASTLAIHE HLTLTSEATV YRNRVDNWTY WNPTTNYHVE NLQLVVARGG
ELTINLAYAR DSWRAGLRAG YALTRSSQER AYDAYSQDVI GKQLVYVPLH TETLNAYVQR
GQTRLTVQTQ VNSRRYITFD NSQFFKGATL TNVLLETTAK IGPVPVRVQG QVNNVFDALM
FSVKRNALPG RNWALNLLIN LPNNTQ
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