| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5745 |
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| Symbol | |
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| ID | 8729520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6988632 |
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| End bp | 6989255 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003390509 |
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| Protein GI | 284040579 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATTA CCTTAATAAT CATCGTTGTC ACGGTTATTA TCAGTGTAGC CGCCTGGAAC
AACTACAGCC TGATGAACCG GTGGATTATG AATCCCTATC AGGTAGCGAG CCGCGGGCAG
TATTACCGCC TGATTACCTC TGGTTTTCTA CATGCCGACT GGGGGCATCT GTTCTTTAAT
ATGCTTAGTC TGTACTTCTT CGGCGGCTTT ATTGAACAGG TATTTACCAT GCTGTTTGAG
GGAAGTGGAG GGCCTTATCT CATTGGCTTT TATCTGGTGG CTATCCTGGT ATCGGATATC
CCCAGTTTTC TGAAACACCG AAACGATCCT GGCTATAACT CGTTGGGGGC ATCGGGGGGC
GTATCGGCCG TTATTTTCGC GGCTATTCTG TTTCGGCCTC TAACACCAAT CTACCTATAC
TTTATTCCGA TTGGTATTCC GGGGTTTATT TTTGGTGCCC TGTATTTGGC TTATTCATAC
TATGAGTCAC GGCGTGGTGC GGGCAATGTT AACCATGACG CTCACTTTTA CGGTGCCTTA
TTCGGGGTTG TCTTCATGAT TATTGTGTAC CCCGAAGTGC TGCCCAGCTT TTTTGAGCAG
ATTGCGGGCT GGCGGCTATT TTAG
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| Protein sequence | MSITLIIIVV TVIISVAAWN NYSLMNRWIM NPYQVASRGQ YYRLITSGFL HADWGHLFFN
MLSLYFFGGF IEQVFTMLFE GSGGPYLIGF YLVAILVSDI PSFLKHRNDP GYNSLGASGG
VSAVIFAAIL FRPLTPIYLY FIPIGIPGFI FGALYLAYSY YESRRGAGNV NHDAHFYGAL
FGVVFMIIVY PEVLPSFFEQ IAGWRLF
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