Gene Slin_5743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5743 
Symbol 
ID8729518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6986805 
End bp6987521 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390507 
Protein GI284040577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGTG GCGTGGGCGT TACGCATTAC TTGGGCGATT TGACCGAAGC GGGTAATCTG 
GGTTATCTGC GGTTGGGGGC AGCCATGAGT GGGGCCGTTG CCTATCGGTA TTCTCCTCAG
CTAACGCTCC GGGCCGAGGC ACAGATCTAC TACATACGCG GTACGCATAA AAACACCCAC
CTGGAATACA ACAACCTTTC ATTTCATAGC ATAAATCCAG ACATCTGGGC GGGTGTGCAA
TGGGATTTCT GGCCCGCCAG CGACCCAAAT CATGTCATTA TTCCCTACGC GCTGGCGGGA
GTCGGACTTA CCTATATGAC GCCTATGGCC GTTTTTAGCG GTCAACCCGT TAGTCTGGCC
CCCTTACAGA CCGAAGGCGT AAAGTACAAC CGGCTGCCCT TCATTGTACG CTACGGACTT
GGTGTACCCA TTCACTCAAC GGAGCGTTTT CGGTGGAATC TGGAGGCTGC CTACACCCAC
GTTTTTAGCG ATTACCTGGA TGACGTGAGT ACGGTGTATC CTGACCTGAC CAGGATGGAT
CCCTTTGCTG CAGCCCTGTC GGACAGGCGT CTTGAGTTGG GTCTGAAGCC AAATGCGCCG
GGAGCCCAAC GGGGTAACAG TCAACGGCGT GATGGTTATT TCATCTTATC GGCAAGGCTT
GTTTTCGTAA TCAACACGCC TTCTTACCGG AATTATCGAC GGATATTTCC CCGTTAG
 
Protein sequence
MNGGVGVTHY LGDLTEAGNL GYLRLGAAMS GAVAYRYSPQ LTLRAEAQIY YIRGTHKNTH 
LEYNNLSFHS INPDIWAGVQ WDFWPASDPN HVIIPYALAG VGLTYMTPMA VFSGQPVSLA
PLQTEGVKYN RLPFIVRYGL GVPIHSTERF RWNLEAAYTH VFSDYLDDVS TVYPDLTRMD
PFAAALSDRR LELGLKPNAP GAQRGNSQRR DGYFILSARL VFVINTPSYR NYRRIFPR