Gene Slin_5703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5703 
Symbol 
ID8729478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6937885 
End bp6938553 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content52% 
IMG OID 
Productputative transcriptional regulator 
Protein accessionYP_003390467 
Protein GI284040537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.643382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAT CGGTTATGGA CTATCAGGCA CTCAAAAACC TGGTCAGGCG GGGAGAGGGT 
AGCAATTTAG AGTTCAAGCT GAAAACGAAC CATCCCGAGA AAATTATTCG GGGCGTCGTC
GCTTTCGCTA ATACAAACGG TGGAGTCATG CTCATTGGCG TCGGTGACGA CAAGAAGATT
CCCGGGCTCA AATACGCCGA TGAGGACGAG TACCTGCTCG TTCGGGCTAT CAACAAGTTT
TGTTTCCCAC GTATTTCATA CACCATTGAA CGCGTACAGC TCTACGACGA GCGCGAAGTT
CTCGTGATCC GTGTGCCCCA AAGCCCAACA CGGCCGCATT ATATTATTCC TGACCCGGCT
GAGCCCGATA ATAAAAAGGC TTACGTGCGC GTCGGCGACA AGTCCGTTCA GGCCAGCCGC
GAAGTGCGTG AAATACTAAA GGGTGAACAG GCCGAGCGCG ACATCCGCTT CACCTACGGG
GAAAAAGAGA AAAAGCTCAT GCAGCATTTG GGTGAGCACA ATAGCATAAC GGTCGACCTG
TTTGCCTCGA TTGCGGGCAT TTCCCGCCGA ATTGCGTCCC GAACGTTGGT ATTGCTCGTA
TTGGCCCACG TACTGGAAAT CCATCCCAGC GACGTAATGG ATAAATATAC ACCCCGTCTG
GTTCAATAA
 
Protein sequence
MNPSVMDYQA LKNLVRRGEG SNLEFKLKTN HPEKIIRGVV AFANTNGGVM LIGVGDDKKI 
PGLKYADEDE YLLVRAINKF CFPRISYTIE RVQLYDEREV LVIRVPQSPT RPHYIIPDPA
EPDNKKAYVR VGDKSVQASR EVREILKGEQ AERDIRFTYG EKEKKLMQHL GEHNSITVDL
FASIAGISRR IASRTLVLLV LAHVLEIHPS DVMDKYTPRL VQ