Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5703 |
Symbol | |
ID | 8729478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6937885 |
End bp | 6938553 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | putative transcriptional regulator |
Protein accession | YP_003390467 |
Protein GI | 284040537 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.643382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCAT CGGTTATGGA CTATCAGGCA CTCAAAAACC TGGTCAGGCG GGGAGAGGGT AGCAATTTAG AGTTCAAGCT GAAAACGAAC CATCCCGAGA AAATTATTCG GGGCGTCGTC GCTTTCGCTA ATACAAACGG TGGAGTCATG CTCATTGGCG TCGGTGACGA CAAGAAGATT CCCGGGCTCA AATACGCCGA TGAGGACGAG TACCTGCTCG TTCGGGCTAT CAACAAGTTT TGTTTCCCAC GTATTTCATA CACCATTGAA CGCGTACAGC TCTACGACGA GCGCGAAGTT CTCGTGATCC GTGTGCCCCA AAGCCCAACA CGGCCGCATT ATATTATTCC TGACCCGGCT GAGCCCGATA ATAAAAAGGC TTACGTGCGC GTCGGCGACA AGTCCGTTCA GGCCAGCCGC GAAGTGCGTG AAATACTAAA GGGTGAACAG GCCGAGCGCG ACATCCGCTT CACCTACGGG GAAAAAGAGA AAAAGCTCAT GCAGCATTTG GGTGAGCACA ATAGCATAAC GGTCGACCTG TTTGCCTCGA TTGCGGGCAT TTCCCGCCGA ATTGCGTCCC GAACGTTGGT ATTGCTCGTA TTGGCCCACG TACTGGAAAT CCATCCCAGC GACGTAATGG ATAAATATAC ACCCCGTCTG GTTCAATAA
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Protein sequence | MNPSVMDYQA LKNLVRRGEG SNLEFKLKTN HPEKIIRGVV AFANTNGGVM LIGVGDDKKI PGLKYADEDE YLLVRAINKF CFPRISYTIE RVQLYDEREV LVIRVPQSPT RPHYIIPDPA EPDNKKAYVR VGDKSVQASR EVREILKGEQ AERDIRFTYG EKEKKLMQHL GEHNSITVDL FASIAGISRR IASRTLVLLV LAHVLEIHPS DVMDKYTPRL VQ
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