Gene Slin_5689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5689 
Symbol 
ID8729464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6924871 
End bp6925944 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390453 
Protein GI284040523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTAA ATATCGTTGC AAAATTAACA AACTTCGGGC ACCAATCGTT TGCCAAGGCT 
ATGTTTGCTT CTGATTTGAA ATTACGGATT TTATTCATAG TATCTACTGG CCTTGTTGCG
TTTACAGTAC AGGCACAAAC GGCCCCGGCT TCACTGACAA CGGCGACTAA ACCGGTTTTA
GCGCCTTCGG GAGCTGCACC CTCACCGCTG GACGGCTTTT CTTCCATACC GTCATCGCTG
ACAACGCTGG GTTTGCCAAC CGGGGCTTCG CTAAAAGATC AGAAAGATGC TTATCTGGCT
GGTATCATGC CTGATTTAGG GTTGAAAGTG AAGCAACTCA AAAAAATGAA AGCTGATCGG
AAGAGTAAGG CGAAGCTGTC GAAAACAGAA TATGAGGGTC TGTCGATGGT GAAAGCATAT
ACCAAATTCG GAAGTGGTGA ACGGACGGTC ATTGAAGAGT TCTTTGTTCT GCGGGATAAT
GATGCCGCTA AACCACTGCC CTACATTCGC GAAATCTACC GGTTTTATCA AAAATCTGCC
CGGGTAACAA GTTCTATCGT TCGGGACGAA GGCACCGGAT TGCTGCTTCA CGGGCCTTAT
AAACGCTACC AGAACGGTGA TCTGGTTGAA GAAGGCTACT ATTATGCCGG CATGAAAGAT
GGGCGCTGGG AAAAGTACGA CAGTAAATTT ATGCTCGTCG ATAAAGCCCG CTGGTATCGG
GGTGTTCCGG CCGAGTCGCG CTTGGTTTAC TACGACTCCA CTCATCGTAA GATAAAGGAA
ATTATTCCCA TGGAGTATGG GAAAGTAAAG GGAACATACA TGGCCTTTTA CGAGAATGGG
CTACTAGCCG AAGAAGGGAA GTACGAAAAC GGGGTTAAAA TTGGCCGATG GACAGAGTAC
TACCCGGTTA ATCCAAACGG TCGCCGGATG CGTCGTAAGT TGTCACAGTA CGCCAAAGAT
CAGTGGGATA CCGAGTTTGA GCCGTATACC ATTACGGAAT GGGATGAAAA AGGCAAAGTG
ACCTTCGAAC GTGCAAAGGA AAAGGTAATT CAGGAAGAAG AAACGGAGAA CTAA
 
Protein sequence
MTLNIVAKLT NFGHQSFAKA MFASDLKLRI LFIVSTGLVA FTVQAQTAPA SLTTATKPVL 
APSGAAPSPL DGFSSIPSSL TTLGLPTGAS LKDQKDAYLA GIMPDLGLKV KQLKKMKADR
KSKAKLSKTE YEGLSMVKAY TKFGSGERTV IEEFFVLRDN DAAKPLPYIR EIYRFYQKSA
RVTSSIVRDE GTGLLLHGPY KRYQNGDLVE EGYYYAGMKD GRWEKYDSKF MLVDKARWYR
GVPAESRLVY YDSTHRKIKE IIPMEYGKVK GTYMAFYENG LLAEEGKYEN GVKIGRWTEY
YPVNPNGRRM RRKLSQYAKD QWDTEFEPYT ITEWDEKGKV TFERAKEKVI QEEETEN