Gene Slin_5675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5675 
Symbol 
ID8729450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6914543 
End bp6915340 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID 
Productcytochrome c oxidase subunit III 
Protein accessionYP_003390439 
Protein GI284040509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.670128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCTA CTGTAACGCA CGATACCCTG ACGACCGATT CGGAGCAAGT GTTCGATAAG 
AAAACCTGGA TGGGTGGAGT TGAACCTATG AAAGTGAGCT ACGGCAAGCT GATGATGTGG
TTCTTCCTGA TCTCGGATAC CTTCACCTTT TCGGCTCTAT TAGTAACGTA TGGCCTGATT
CGGTACAGCT ACCCAGCCTG GGATCCAGCA GTATTCGGTG AAGTGTTCAA ATTCTCGAAC
CTCTATTGGC CAACCCCAGA GAAGGTATAT AACTCAGTTC CATTTCTACA TGGCGTTGAT
TTACCTCTTA TTTTCGTGGG TATCATGACG TTCATTCTTA TCTTCAGTAG CGTAACCATG
GTGTTAGCTG TTGAAGCGGG TCACCGGATG GACCGCAAGG ATGTTGAGAA GTATATGTTA
TGGACTATCT TAGGCGGTTT CACCTTTCTG GGTAGTCAGG CATGGGAGTG GAGTCACTTT
ATCCACGGTA CAGAGACTGG CACAACAATC ACCGAACTGA TAAATGGCCA GGCTATTCAA
CGCACTATTT TCGGGGCTAA CCTTGTCGAA AATCAGTATG GACCACCTGC CTTCGCTGAC
CTGTTTTTCT TTATTACGGG TTTCCACGGA ACGCACGTAT TTAGTGGAGT GGTCCTGAAT
ATCCTGATTT TCTATCGGGC ATCAACTGGC CTTTATGAGC GTCGTGGCCA TTATGAAATG
GTTGAGAAAG TTGGTCTGTA CTGGCACTTT GTTGATCTGG TTTGGGTATT TGTCTTTACA
TTTTTCTATC TGGTTTAA
 
Protein sequence
MAATVTHDTL TTDSEQVFDK KTWMGGVEPM KVSYGKLMMW FFLISDTFTF SALLVTYGLI 
RYSYPAWDPA VFGEVFKFSN LYWPTPEKVY NSVPFLHGVD LPLIFVGIMT FILIFSSVTM
VLAVEAGHRM DRKDVEKYML WTILGGFTFL GSQAWEWSHF IHGTETGTTI TELINGQAIQ
RTIFGANLVE NQYGPPAFAD LFFFITGFHG THVFSGVVLN ILIFYRASTG LYERRGHYEM
VEKVGLYWHF VDLVWVFVFT FFYLV