Gene Slin_5669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5669 
Symbol 
ID8729444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6907692 
End bp6909002 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content44% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390433 
Protein GI284040503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGG CTCACGCAAT ACCGTCCTTA GACGAAGAAT TTGAATTTAC TGCGGACTCC 
AAACGTCGGT TAATGATCGG TATTGGAGCC GGAGTCGCGT TAGTAGCAAT TGGCGCATAC
CTGTTGGCAT CGGGTGTTGG TTCACATGAA ACCCATGTGG CCGTACATGA TGCTGGTGCT
GGCGCTCATG AAGGCGGTGG CCACCACGCG TACAAATGGA CTAACCGTTT GTGGGCTAAC
GTGTGGCTTA ACGCTGTTTA TTTTGCAGGT GCCTCCGTTA TCGGTATGTT CTTCATATCC
TATAACTACT TAGCGCAGGC TGGTTGGTCA TCTGCTTTCA AGCGTATCCC AGAGGCTCTT
CCCGCATTTC TGCCGTTTAC AGGAATTGCC ATTTTAGCCG TATTCTTTAT TGCCGGACAT
GATTTGTTCC ACTGGCTGAA TCCGGCACTG TTTGACCCCT CAAGCGCTGA ATTCGATCCA
ATCATCAATG GTAAGAAAGG CTTTTTGAAC ATGCCTTTTT ACCTGACACG CATTGTTCTC
TACTTTGCTC TGTGGTACAT GATGTGGCGT GTTATTCGTA ATTACTCCTT ACAGGAAGAT
CTGGAAGGTG GCACCGAGTA CTATGACAAG AGTATTAAAC TTGGTACAGC GTTTCTTCTA
GTGTTTGGCG TTACTTCATC AACATCGGCC TGGGACTTTG TAATGTCAAT TGACACACAC
TGGTTCAGCA CTATGTTTGG CTGGTACACA CTGGCTAGTT GGCACGTTAC AGGTTTGGCT
ATTATCACAT TAACAGTCGT TACCCTTAAG GAAAGAGGTT ACCTGAAGAT CGTGAATGAC
AGCCATTTAC ATGACTTGGG TAAATTCATG TTTGCCTTCA GTATCTTCTG GACATACGTG
TGGTTTGCAC AGTTTATGCT TATTTACTAC GCTAACCTTC CAGAGGAAAC TATTTACTAT
CGCGAACGCT TTAGTGGTTA TGGGGGTATT TACAAGGCAC CATTCTTTAT AAACTTGTTC
TTGAATTTTG TGTGTCCATT CCTGATTTTG ATGACACGGG ATGCAAAACG GACTTATATT
ATTCTGAAGC TGGCAGCCTG GTGTATCATC ATTGGTCATT ACTTTGACTT CTACGTTAAT
ATTATGCCGG GAACGGTAGG TGAGCACGGC GGTTTTGGTC CGATTGAATT CGGTATGATT
CTTATTTTCG CGTGTGGTTT TATCTGGAGT GTTTCTTCTC AGTTAACGAA AGCTAACCTG
ATTCCAAAGA ATCACCCTAT GCTCGTAGAG ACGTTACACC ACGATATTTA A
 
Protein sequence
MASAHAIPSL DEEFEFTADS KRRLMIGIGA GVALVAIGAY LLASGVGSHE THVAVHDAGA 
GAHEGGGHHA YKWTNRLWAN VWLNAVYFAG ASVIGMFFIS YNYLAQAGWS SAFKRIPEAL
PAFLPFTGIA ILAVFFIAGH DLFHWLNPAL FDPSSAEFDP IINGKKGFLN MPFYLTRIVL
YFALWYMMWR VIRNYSLQED LEGGTEYYDK SIKLGTAFLL VFGVTSSTSA WDFVMSIDTH
WFSTMFGWYT LASWHVTGLA IITLTVVTLK ERGYLKIVND SHLHDLGKFM FAFSIFWTYV
WFAQFMLIYY ANLPEETIYY RERFSGYGGI YKAPFFINLF LNFVCPFLIL MTRDAKRTYI
ILKLAAWCII IGHYFDFYVN IMPGTVGEHG GFGPIEFGMI LIFACGFIWS VSSQLTKANL
IPKNHPMLVE TLHHDI