Gene Slin_5639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5639 
Symbol 
ID8729413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6868987 
End bp6869796 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content51% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003390403 
Protein GI284040473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAA CGGCCGATAG TCAACAATTT ACATTTCAGG GTAGCCGCAT TAGTTATCAG 
CAGTTTGGCA GCGGCCCGGC TGTGTTGCTG GCATTTCACG GCTTCGGCCA GAATAACGAC
ATCTTCAGCG TACTGGAGAA GCCGCTCGGC GGGCAATTTA CCATTTTCGC GATTGATTTA
TTCTTCCACG GAAACAGCCA TTATCTGGGT ACCAGCATGC TGACTAAAGA GTTTTGGTGT
GAGCTGATTG GTCATTTTTT ACAGACTCAC AACATAGCCC GGTTTTCACT GATGGGTTTT
AGCCTGGGGG GCCGGTTTGC GCTGGTAACA GCGGAAGCGT TGGCAGCGCG TCTTGATCAA
CTGATTTTAG TTGCTCCTGA TGGCATTACG CTCAATCACT GGTACTGGCT GGCAACAAGC
TCCAGCCCCG GCCGCACGCT GTTCCGCTAC GTAATGCGTC ATTTGTCCAT GCTAAGTACG
TTCGGCCATT TGTTGACCCG GTTAGGCCTG CTTAACAAAA CAGTCATGCG GTTCGCCGAG
ATTTCTCTGG CAACACCTGA TCAACGCGCT TTGGTGTACC GCAGTTGGAC GCAGTTCCGC
TTGCTTCACC CTGCCCTGAA ACTGATTGCA CACAGACTCC AGGAGCATTC GGTACGGGTA
CGCTTCTTTA CGGGCGCTTT CGACCGTATT GTGCCGGGTA CCTATGTCCT TCCTCTAACA
AACCAGCTAC AGCAGTACGA ACTAACAGTG TTAAAAACGG GTCATAATCG ACTGGTTGAA
TTAGCGGGCG AGAAGATTGG TATGAGTTAA
 
Protein sequence
MSETADSQQF TFQGSRISYQ QFGSGPAVLL AFHGFGQNND IFSVLEKPLG GQFTIFAIDL 
FFHGNSHYLG TSMLTKEFWC ELIGHFLQTH NIARFSLMGF SLGGRFALVT AEALAARLDQ
LILVAPDGIT LNHWYWLATS SSPGRTLFRY VMRHLSMLST FGHLLTRLGL LNKTVMRFAE
ISLATPDQRA LVYRSWTQFR LLHPALKLIA HRLQEHSVRV RFFTGAFDRI VPGTYVLPLT
NQLQQYELTV LKTGHNRLVE LAGEKIGMS