Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5639 |
Symbol | |
ID | 8729413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6868987 |
End bp | 6869796 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003390403 |
Protein GI | 284040473 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAA CGGCCGATAG TCAACAATTT ACATTTCAGG GTAGCCGCAT TAGTTATCAG CAGTTTGGCA GCGGCCCGGC TGTGTTGCTG GCATTTCACG GCTTCGGCCA GAATAACGAC ATCTTCAGCG TACTGGAGAA GCCGCTCGGC GGGCAATTTA CCATTTTCGC GATTGATTTA TTCTTCCACG GAAACAGCCA TTATCTGGGT ACCAGCATGC TGACTAAAGA GTTTTGGTGT GAGCTGATTG GTCATTTTTT ACAGACTCAC AACATAGCCC GGTTTTCACT GATGGGTTTT AGCCTGGGGG GCCGGTTTGC GCTGGTAACA GCGGAAGCGT TGGCAGCGCG TCTTGATCAA CTGATTTTAG TTGCTCCTGA TGGCATTACG CTCAATCACT GGTACTGGCT GGCAACAAGC TCCAGCCCCG GCCGCACGCT GTTCCGCTAC GTAATGCGTC ATTTGTCCAT GCTAAGTACG TTCGGCCATT TGTTGACCCG GTTAGGCCTG CTTAACAAAA CAGTCATGCG GTTCGCCGAG ATTTCTCTGG CAACACCTGA TCAACGCGCT TTGGTGTACC GCAGTTGGAC GCAGTTCCGC TTGCTTCACC CTGCCCTGAA ACTGATTGCA CACAGACTCC AGGAGCATTC GGTACGGGTA CGCTTCTTTA CGGGCGCTTT CGACCGTATT GTGCCGGGTA CCTATGTCCT TCCTCTAACA AACCAGCTAC AGCAGTACGA ACTAACAGTG TTAAAAACGG GTCATAATCG ACTGGTTGAA TTAGCGGGCG AGAAGATTGG TATGAGTTAA
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Protein sequence | MSETADSQQF TFQGSRISYQ QFGSGPAVLL AFHGFGQNND IFSVLEKPLG GQFTIFAIDL FFHGNSHYLG TSMLTKEFWC ELIGHFLQTH NIARFSLMGF SLGGRFALVT AEALAARLDQ LILVAPDGIT LNHWYWLATS SSPGRTLFRY VMRHLSMLST FGHLLTRLGL LNKTVMRFAE ISLATPDQRA LVYRSWTQFR LLHPALKLIA HRLQEHSVRV RFFTGAFDRI VPGTYVLPLT NQLQQYELTV LKTGHNRLVE LAGEKIGMS
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