| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5636 |
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| Symbol | |
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| ID | 8729410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6864470 |
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| End bp | 6866851 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003390400 |
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| Protein GI | 284040470 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.734932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC CGACGACCTC CTCGTTTCTT CTGATAGCTT TTTTATGGCT ATCTATGCGG
CCCGCTTGGG CTCAACTCAC CGTTTCGGGT ACCGTCAGCG ATGCCGATGG CGGCCCGCTA
CCCGGTGCTG CCGTTGTACT GATAGATACG TATAAGGGCA CCTTTACAGA TGCTTCCGGC
GCTTTTCAGT TGACCAATCT TAAATCTGCC CCCGTAGTGT TGCAGATTTC TATGCTGGGC
TACGAAACTA AAAACCAGAC GTTTAATTCA AATCAAAACG CTTCATTAAC AATAAAATTA
TCAAAAACTG CTGTAGCTGT CGATGAGGTG GTTGTGAGTG CCACCCGGGC GAACCAGAAA
TCAGCCATTG CCTACACGGA TGTGACCCGC CGGGATCTTA ATAAATTGAA TCTGGGGCAG
GATATTCCGC AATTGCTCAA TTTCACGCCA TCCATTGTAA CGACTTCCGA TGCCGGAGCG
GGCGTTGGTT ACACCGGCAT TCGCATTCGA GGGTCCGATG CCACACGGGT AAACGTGACC
CTCAATGGCA TTCCGTATAA TGATGCCGAG TCGCAGGGGA CGTTTTTTGT CAATATGCCG
GACTTTGCAT CGTCAGTGAG TACGATTCAG ATTCAGCGTG GGGTGGGTAC GTCGACCAAT
GGGGCCGGGG CGTTTGGGGC ATCAGTCAAT ATTCAGACGA ATAAGCTGGA AGAAAAGCCG
TATGCCGAGA CAAATCTGTC GGGTGGTTCG TTCGGGACGC GGAAAGTGAA TGTGCTGGCC
GGAACGGGCC TTCTGAATAA TCATTTTGTA CTGGATGCGC GCCTGTCGAA AATTTACTCA
GACGGCTACA TCGACCGCGC TTCCTCCGAT TTGAGGTCTT TTTACCTCTC CGGTGGGTAC
TATACTAAAA AGAGCTTTTT TCGGTTGAAC GTGTTTTCGG GTCAGGAAAA AACCTATCAG
GCCTGGAACG GCGTGCCGGA GCAATATCTA AAAACCAACC GGACGTATAA TTCCTTTACG
TACGATAACC AGACCGACAA CTACCAGCAG GATAATTACC AGTTGATCAC CTCACACGAG
TTGACCAAAA ACTGGCGAGC AAACCTGTCG TTCTTTTATA CGAAAGGGAA AGGGTATTAC
GAAGAGTACA GAACAGCGGA TAATTTTAGC AGTTATGGGC TACCTAATGT AGTCATTGGT
GATTCGACCA TTAAGCAGAC TGATCTGATC CGGCGGCTGT GGCTCGACAA TGACTTCTAC
GGCACCGTTT TTTCATTCGA CTACAACAGT TTCGGGAAGT TAACGGCCAA CATCGGCGGT
GGCTGGAATC AGTACAAAGG CATCCACTAC GGCGAAATTA TCTGGTCGCG GGTGGCCGGG
AGCAGTAATA TCCGGGATCG CTACTATCAG GACGATGCGA CCAAACGTGA TTTCAACCTG
TTTGCTAAAG CGTTTTATCA ATTGACTCCA AAGCTGAACG GCTTTCTCGA TGCGCAGATT
CGGACGATTA ATTATTCATT TTTAGGCTAT AATAGTCAAT TGCAGAACGT TCAGCAGGAC
GCCAAGCTCA CGTTCTTCAA CCCGAAAGCC GGTTTTACCT ACACCATAAA TGACCGTAGC
ACGGTATATG CCTCGGTAGG CGTGGGCCAG CGGGAGCCAA ATCGCAATGA TTATACGCAA
TCGACGCCCG AAAGTCGCCC GAAAGCGGAA AAACTGATTG ATTACGAAGC AGGCTACAAA
GTTCAGGGTG AGAAACTGGC CTTTACAGCC AACGCCTATT ACATGGACTA CAAGAATCAA
CTGGTACTGT CGGGTCAGTT GAACGACGTA GGAGCGTATA ACCGGGTCAA TATTCCAAGT
AGCTATCGGG CGGGTATTGA ACTCGAAGCG GGCGCACGTC TGGCTAAACA ACTGCGCTGG
AATGTTAACG CGACCTTCAG CCGCAATCGG GTGAAAAACT TTACCGAGTA CCTGGATAAC
CTCGACAACG GACAGCAGGA AACACGTCAG TATCGTGAGA CGGATATTTC GTTTTCCCCG
AACGTCATTG CCGGTTCACA ACTGTTGTTT ACGCCCGCTA AAGGGCTGGA ACTTGCCCTT
CTCTCGAAAT ATGTTGGTAA GCAATACCTT GACAACACGT CGAACGAAAG CCGCAAGCTG
AATCCGTACT TCACAAACGA CATTCGGGTG ATTTATTCGA TTAAGCCAAA ATTCGCGCAG
GAAATCGCCT TTACATTATT GTTCAACAAT GTGCTCAACG AACTATATGA GTCGAACGGC
TTCACGGTTC CGTACATCGC AGAAGGAAAA GTAACTGCCG ATAACGGGTA TTATCCGCAA
GCGGGGCGGA ATTTTCTGGC CGGGGTGCGG GTGCGTTTCT AG
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| Protein sequence | MKKPTTSSFL LIAFLWLSMR PAWAQLTVSG TVSDADGGPL PGAAVVLIDT YKGTFTDASG
AFQLTNLKSA PVVLQISMLG YETKNQTFNS NQNASLTIKL SKTAVAVDEV VVSATRANQK
SAIAYTDVTR RDLNKLNLGQ DIPQLLNFTP SIVTTSDAGA GVGYTGIRIR GSDATRVNVT
LNGIPYNDAE SQGTFFVNMP DFASSVSTIQ IQRGVGTSTN GAGAFGASVN IQTNKLEEKP
YAETNLSGGS FGTRKVNVLA GTGLLNNHFV LDARLSKIYS DGYIDRASSD LRSFYLSGGY
YTKKSFFRLN VFSGQEKTYQ AWNGVPEQYL KTNRTYNSFT YDNQTDNYQQ DNYQLITSHE
LTKNWRANLS FFYTKGKGYY EEYRTADNFS SYGLPNVVIG DSTIKQTDLI RRLWLDNDFY
GTVFSFDYNS FGKLTANIGG GWNQYKGIHY GEIIWSRVAG SSNIRDRYYQ DDATKRDFNL
FAKAFYQLTP KLNGFLDAQI RTINYSFLGY NSQLQNVQQD AKLTFFNPKA GFTYTINDRS
TVYASVGVGQ REPNRNDYTQ STPESRPKAE KLIDYEAGYK VQGEKLAFTA NAYYMDYKNQ
LVLSGQLNDV GAYNRVNIPS SYRAGIELEA GARLAKQLRW NVNATFSRNR VKNFTEYLDN
LDNGQQETRQ YRETDISFSP NVIAGSQLLF TPAKGLELAL LSKYVGKQYL DNTSNESRKL
NPYFTNDIRV IYSIKPKFAQ EIAFTLLFNN VLNELYESNG FTVPYIAEGK VTADNGYYPQ
AGRNFLAGVR VRF
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