Gene Slin_5613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5613 
Symbol 
ID8729387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6830640 
End bp6831269 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content50% 
IMG OID 
Productpeptidase S16 lon domain protein 
Protein accessionYP_003390377 
Protein GI284040447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.923025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA CGCTCTCTTT GTTTCCGCTC AACCTGATTG TTTATCCTGG CGAGGATTTG 
AATCTGCATA TTTTTGAACC ACGCTACCGT CAGCTCATCA ACGAATGCCT GGAAGAAGAG
CGGACATTTG GGATTCCGGC TTTCATTAAC AACAAGCTCC CCGGCTACGG AACCGAAATG
CACGTAACCA CGCTGCACAA ACGCTATCCC GACGGCCGAA TGGACATTAA ATCGAAAGGT
CTGGGCGTTT TTAAGCTGGT AAACTTCGAG AATCCGATAC CGGGAAAACT GTATGCTGGC
GGTGAAGTAG AGATACTTTC ACCCGGCGAC AGCTACAGCG CCCACGCATC GGCCCTGGTC
GAACGGCTGG AGCGATTGTA TAACCTGCTT CAAATCGAAA CAGATTACTC AGCTTCATCG
GAGAACCTAT CTTATAAGGT AGCGCATAAA GTCGGGCTAT CCATCGAGCA GGAATACGAA
CTGCTGACCC TCGAAACGGA AGCCGAACGC CAGCTTTTCC TGATACAACA CCTCAATAAC
GTACTTCCGG TAGTGTCGGA CATGGAGCGC ACCAAGCAGC GCATCCGCAT GAACGGCCAT
TTTAAGAACT TGGACCCGTT GAATTTTTAG
 
Protein sequence
MEKTLSLFPL NLIVYPGEDL NLHIFEPRYR QLINECLEEE RTFGIPAFIN NKLPGYGTEM 
HVTTLHKRYP DGRMDIKSKG LGVFKLVNFE NPIPGKLYAG GEVEILSPGD SYSAHASALV
ERLERLYNLL QIETDYSASS ENLSYKVAHK VGLSIEQEYE LLTLETEAER QLFLIQHLNN
VLPVVSDMER TKQRIRMNGH FKNLDPLNF