Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5612 |
Symbol | |
ID | 8729386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6829394 |
End bp | 6830545 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | protein of unknown function UPF0118 |
Protein accession | YP_003390376 |
Protein GI | 284040446 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTC GCTCCCGGGA AATTGAGCTC CCATCGTACG CAAAACTTGT TTGCGTACTG CTGTCGCTGG TTATTATTGT CTATGGCTTA CATGAGTTGC AGGGTCTGCT GATTCCACTG GTTTTTGCCA TCCTGTTTTC TGTTTTACTG TTTCCATTGG TGCAGCGGCT CGAAAACTGG GGTGTTCCAA GAATACTAGC CATTGTTATA TGCCTGTTAC TGGCTCTGGG GGCGTTAACA GCCTTATTCT GGGGTGTATC CGTCCAGATC AGTAGCTTCT CGGAAGTGAT TCCGCAGTTT GTAAAGCGCG GAAGTCAATA CATTGACAGT ATCCAGACCT TTGCCGACGA ACAACTGAAT ATCGACCGGA AGCGGCAGGT GGCCGAAATT AAGAAGTACC TGAATCAGGC GCTGGCCGAG GGTGGTACCA TTCTAACGAC CACGTTGCTG GCTACAACCA GTATTCTGAC GAACCTGTTT CTGGTCTTGC TATTTGCCTT CTTTTTCCTG CTTTACCGCG ACTTCTTCCG CTCGTTCTTC TACAAAGTAT TCGACGATAC CCGCCGGTCG AAGATCGACG ATGTTATGAG TGGTATTTAT GAAGTTGTTA AAGATTATCT GGCCGGTCTG GTGCTGGTAA TCCTGATCAT CGGCACGTTA ATGACGGTTG GACTGCTTAT TCTGGGCGTA GATTATGCGG TGTTTTTTGG CTTCTTTGGG GCCTGCCTGG TGCTGATTCC ATACTTCGGG ATTTCGATGG GGTCGTTACT ACCGGCGGCT TATACGCTTG TCACGCAGGA TAACCCCCTC AAGGCACTGG GCGTTATTGG CGTTTTTCTG TTCGTGCAAA CGCTGGAAGG CAACTTTATC ACCCCTTACA TTGTGGGATC TAAAGTGAGT ATCAATCCGC TGGCAGCCAT CGTTGTGCTG ATTTTGTGGG AAAACGTATG GGGATTGCCG GGTCTGATTT TAGCCTTACC CATGACGGCC ATCATAAAAG TTATTTTCGA TTCTGTAGAG GCCCTCAAAC CGTACGGCTT TGTCATTGGC GAAGCTGAGA AGCCGCGCCC ACCCATCAAA AACCTCCAGG AACTAGCCGA CCAGCTACCC AAACGAGCGA AAAAAGTCGG GAAAGTGGAG GAGAAGAATT AG
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Protein sequence | MNIRSREIEL PSYAKLVCVL LSLVIIVYGL HELQGLLIPL VFAILFSVLL FPLVQRLENW GVPRILAIVI CLLLALGALT ALFWGVSVQI SSFSEVIPQF VKRGSQYIDS IQTFADEQLN IDRKRQVAEI KKYLNQALAE GGTILTTTLL ATTSILTNLF LVLLFAFFFL LYRDFFRSFF YKVFDDTRRS KIDDVMSGIY EVVKDYLAGL VLVILIIGTL MTVGLLILGV DYAVFFGFFG ACLVLIPYFG ISMGSLLPAA YTLVTQDNPL KALGVIGVFL FVQTLEGNFI TPYIVGSKVS INPLAAIVVL ILWENVWGLP GLILALPMTA IIKVIFDSVE ALKPYGFVIG EAEKPRPPIK NLQELADQLP KRAKKVGKVE EKN
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