Gene Slin_5612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5612 
Symbol 
ID8729386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6829394 
End bp6830545 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content49% 
IMG OID 
Productprotein of unknown function UPF0118 
Protein accessionYP_003390376 
Protein GI284040446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC GCTCCCGGGA AATTGAGCTC CCATCGTACG CAAAACTTGT TTGCGTACTG 
CTGTCGCTGG TTATTATTGT CTATGGCTTA CATGAGTTGC AGGGTCTGCT GATTCCACTG
GTTTTTGCCA TCCTGTTTTC TGTTTTACTG TTTCCATTGG TGCAGCGGCT CGAAAACTGG
GGTGTTCCAA GAATACTAGC CATTGTTATA TGCCTGTTAC TGGCTCTGGG GGCGTTAACA
GCCTTATTCT GGGGTGTATC CGTCCAGATC AGTAGCTTCT CGGAAGTGAT TCCGCAGTTT
GTAAAGCGCG GAAGTCAATA CATTGACAGT ATCCAGACCT TTGCCGACGA ACAACTGAAT
ATCGACCGGA AGCGGCAGGT GGCCGAAATT AAGAAGTACC TGAATCAGGC GCTGGCCGAG
GGTGGTACCA TTCTAACGAC CACGTTGCTG GCTACAACCA GTATTCTGAC GAACCTGTTT
CTGGTCTTGC TATTTGCCTT CTTTTTCCTG CTTTACCGCG ACTTCTTCCG CTCGTTCTTC
TACAAAGTAT TCGACGATAC CCGCCGGTCG AAGATCGACG ATGTTATGAG TGGTATTTAT
GAAGTTGTTA AAGATTATCT GGCCGGTCTG GTGCTGGTAA TCCTGATCAT CGGCACGTTA
ATGACGGTTG GACTGCTTAT TCTGGGCGTA GATTATGCGG TGTTTTTTGG CTTCTTTGGG
GCCTGCCTGG TGCTGATTCC ATACTTCGGG ATTTCGATGG GGTCGTTACT ACCGGCGGCT
TATACGCTTG TCACGCAGGA TAACCCCCTC AAGGCACTGG GCGTTATTGG CGTTTTTCTG
TTCGTGCAAA CGCTGGAAGG CAACTTTATC ACCCCTTACA TTGTGGGATC TAAAGTGAGT
ATCAATCCGC TGGCAGCCAT CGTTGTGCTG ATTTTGTGGG AAAACGTATG GGGATTGCCG
GGTCTGATTT TAGCCTTACC CATGACGGCC ATCATAAAAG TTATTTTCGA TTCTGTAGAG
GCCCTCAAAC CGTACGGCTT TGTCATTGGC GAAGCTGAGA AGCCGCGCCC ACCCATCAAA
AACCTCCAGG AACTAGCCGA CCAGCTACCC AAACGAGCGA AAAAAGTCGG GAAAGTGGAG
GAGAAGAATT AG
 
Protein sequence
MNIRSREIEL PSYAKLVCVL LSLVIIVYGL HELQGLLIPL VFAILFSVLL FPLVQRLENW 
GVPRILAIVI CLLLALGALT ALFWGVSVQI SSFSEVIPQF VKRGSQYIDS IQTFADEQLN
IDRKRQVAEI KKYLNQALAE GGTILTTTLL ATTSILTNLF LVLLFAFFFL LYRDFFRSFF
YKVFDDTRRS KIDDVMSGIY EVVKDYLAGL VLVILIIGTL MTVGLLILGV DYAVFFGFFG
ACLVLIPYFG ISMGSLLPAA YTLVTQDNPL KALGVIGVFL FVQTLEGNFI TPYIVGSKVS
INPLAAIVVL ILWENVWGLP GLILALPMTA IIKVIFDSVE ALKPYGFVIG EAEKPRPPIK
NLQELADQLP KRAKKVGKVE EKN