| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5596 |
|---|
| Symbol | |
|---|
| ID | 8729370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6810721 |
|---|
| End bp | 6811419 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003390360 |
|---|
| Protein GI | 284040430 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.273461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAAG TTGATTCACT AACGGTCCAT AAAGGAGAGA TTGACATTTT ATCGGAGGTA
AGTTTTGAGA TCAACCCAAG CGAAACTGTC TGTATGCTAG GTCGTAACGG GGCTGGCAAG
ACTACATTGT TGCGGGCCAT TCTGGGAGCC GAGCCTATAG TATCAGGTCA AGCGATAGTG
CAAGGTTATG ATATGCACCG GCCCGAACGC CAACATGTTT TAACTGATGT TGGGGCTGCT
ATTTACCCTA ATTCGTTTTA CAGTTATCTG TCAGCCCTTG AGAATCTTTG GATTACGCAA
CGGTATTACG GCGTAACCCG TTTTTCGGTG GACGAAATGT TGCATCGCTT CGAGTTGTAT
GACGTTCGCC AACGACCCGC CAGTCAACTT TCGGCGGGTA TGAAACAACG CTTGCTACTA
GCTTTGGCGT TTATTAACAA GCCTACACTC TTATTGCTCG ATGAACCGTT TAATGCCGTT
GACCGCGACA ACACACGCTT TATTTTACAG CTACTTGCCG AGTTACAACG CGAATATCAA
ACAACCGTCT TACTGACCAG CCATTCATTG CCCGATGTAG AAACGCTTTA TAGCAGAATA
CTTTTGCTTA AAGCAGGCCG ATTGGTAGCC GACCGGACAA AAATCGATTT AACAAACAGT
GGAATTTCTT TAACCGACTT CTACGATACT ATTGCCTGA
|
|---|
| Protein sequence | MLKVDSLTVH KGEIDILSEV SFEINPSETV CMLGRNGAGK TTLLRAILGA EPIVSGQAIV
QGYDMHRPER QHVLTDVGAA IYPNSFYSYL SALENLWITQ RYYGVTRFSV DEMLHRFELY
DVRQRPASQL SAGMKQRLLL ALAFINKPTL LLLDEPFNAV DRDNTRFILQ LLAELQREYQ
TTVLLTSHSL PDVETLYSRI LLLKAGRLVA DRTKIDLTNS GISLTDFYDT IA
|
|---|
| |