Gene Slin_5565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5565 
Symbol 
ID8729339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6775082 
End bp6776326 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content50% 
IMG OID 
Productaspartate kinase 
Protein accessionYP_003390330 
Protein GI284040400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTT TCAAATTTGG CGGGGCTTCG GTAAAGGATG CTGCCGGTGT ACGCAATCTG 
GCCGATATTG TCCAAAAACA GGGTAAGGAT ATCGTTGTTG TCGTCTCGGC TATGGGCAAG
ACAACCAACG CGCTGGAAGC CCTCGTTCGG GCGTATGTAG ATGTGCGACC GGAGGACGTT
CAGGCGCAAC TGGCTAGCTT AAAAGGCTAC CATACGGACA TCATGGACGA CCTGACCGGC
AACTACGATC AGGTTCATTA TACATTCGGG CAGCTGGAAA ATTACCTGAA AAGCCCGGTT
AGCGCTTCAT TCGATGAGGT ATACGACCAG ATTGTTTCGG TAGGTGAACT CTTGTCTACG
CAGATTATTT TCGGCTACCT GAACAAGATT GGCCTTTCAA GCCGCTGGCT CGATTCCCGC
CAACTGGTTC GAACGGACGC AACCTTTCGG GAAGGCAAGG TCGACTGGGA GTTTACTAGT
CGGCAAATAA GCAGTGCGGT AAAAAAGAAT GGGATTAACA TCACTCAGGG GTTTATTGGC
CAGACGGAAG ATGGGCGAAC CACTACGCTT GGCCGCGAAG GGTCGGACTA TACTGCGGCT
ATCTATGCCT TTTGCCTGAA TGCCGAAAGC GTTACAATCT GGAAAGACGT ACCGGGTGTG
CTGAACGCCG ACCCAAAATG GTTCGATGAC ACCGTCCTTC TGGAGCGGCT AACCTACCAG
GATGCTATTG AACTGGCGTA TTACGGCGCA ACGGTCATTC ACCCAAAAAC GATCAAGCCC
CTTCAGAACA AAGGCATCCC GCTCTATGTA CGCTCCTTTC TGAAGCCGGA AGCCGCCGGA
ACGGTCATTG GCAATTACGA ACAGCACCTC AGCATTCCAT CGTTTATTTT CAAAGTCAAT
CAGGTACTGA TTTCGCTGCA TCCGAACGAT TTTTCATTCA TCGCGGAAGA TAACTTAAGT
CGGATCTTCG GCTTGTTTGC GCAGGCGGGG GTTAAAATCA ATCTGATGCA AAACACCGCC
ATTAGCTTCT CCGTGGTTGT CGATAACAAT CCCGACCGGG TGCCTGCTTT ACTGAATCTA
TTAAAACAGG ATTTCCGGGT AACGTACAAC AGCGACGTGG AGTTGGTCAC GATCCGCTAC
TACGACCAGG GAACCATAGA TCGCGTGATG CCGAACAAAA AACTCCTGCT GGAGCAAAAA
AGCCGGTATA CGGTTCAGCT TGTTGTCAAG GATTTGAGTA ACTAA
 
Protein sequence
MKVFKFGGAS VKDAAGVRNL ADIVQKQGKD IVVVVSAMGK TTNALEALVR AYVDVRPEDV 
QAQLASLKGY HTDIMDDLTG NYDQVHYTFG QLENYLKSPV SASFDEVYDQ IVSVGELLST
QIIFGYLNKI GLSSRWLDSR QLVRTDATFR EGKVDWEFTS RQISSAVKKN GINITQGFIG
QTEDGRTTTL GREGSDYTAA IYAFCLNAES VTIWKDVPGV LNADPKWFDD TVLLERLTYQ
DAIELAYYGA TVIHPKTIKP LQNKGIPLYV RSFLKPEAAG TVIGNYEQHL SIPSFIFKVN
QVLISLHPND FSFIAEDNLS RIFGLFAQAG VKINLMQNTA ISFSVVVDNN PDRVPALLNL
LKQDFRVTYN SDVELVTIRY YDQGTIDRVM PNKKLLLEQK SRYTVQLVVK DLSN