Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5563 |
Symbol | |
ID | 8729337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6771697 |
End bp | 6772548 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | aminotransferase class IV |
Protein accession | YP_003390328 |
Protein GI | 284040398 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTACG GATATTTCAA CGGTACCATC GCCCCTACCG ACCAGCTTGC GGTTGGCATC ACCGACCTCG GCCTTTTGCG GGGCTATGGC CTATTTGATT ACTTCCTGAC GTACAACGGA CGACCGTTCC AGTGGGATTG GTACTGGGCA CGATTTCAGA ACTCGGCCTC CCGCATGCAC CTGAAACTGC CGCTGGGCAA AGACGAAACG TATGCGATTG TCATGAAACT GGTGGAACGC AGTAACGAAG CGATCAGCAA AACCGGGAAG GCTACACCAA CCGACGTTGG TATTCGATTT GTGTTGACGG GTGGTTATTC AGCAGACAGT ATCAGCGTAG AGAAGCCCAA TCTGCTTATC CTGGCCGAAA TGATTCATCC GGTTCCGGCC ATTCAGTATG AGCAGGGGAT AAAAGTGATT CTGGATGAGT ATGTTCGGGA AATGGCCGAA GTAAAAAGTA CTGACTACAA ACGTGTGATT CTGATGGCCG AAGCCATTCG GGCCGCTCGT GCGTCGGACA TATTGTACCA GAAAGGGGGC GAAATCAGCG AACTGAGCCG GAGCAATTTC TTTATCGTCA AAGGCGAAAA AATCAGTACA CCAGACCGGC ATATTCTGCA CGGTATTACG CGAAAAACCG TGATGCAACT GGCTCAAAGT GACTTCCAAG TTGAAGAACG ACCGGTACTT CTTTCCGAGC TTTACGACGC CGATGAAGCC TTTACCACCA GTTCAACCAA GAAAATACTG CCCATCACCC AGATCGGTGA ACTGACCATT GGTGACGGGC ATGTTGGTCC TAAATCAAAG TTTCTGCTGG AACGGTTCGA TGAACTGGTT AAGACCTGGT AA
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Protein sequence | MFYGYFNGTI APTDQLAVGI TDLGLLRGYG LFDYFLTYNG RPFQWDWYWA RFQNSASRMH LKLPLGKDET YAIVMKLVER SNEAISKTGK ATPTDVGIRF VLTGGYSADS ISVEKPNLLI LAEMIHPVPA IQYEQGIKVI LDEYVREMAE VKSTDYKRVI LMAEAIRAAR ASDILYQKGG EISELSRSNF FIVKGEKIST PDRHILHGIT RKTVMQLAQS DFQVEERPVL LSELYDADEA FTTSSTKKIL PITQIGELTI GDGHVGPKSK FLLERFDELV KTW
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