Gene Slin_5563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5563 
Symbol 
ID8729337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6771697 
End bp6772548 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content50% 
IMG OID 
Productaminotransferase class IV 
Protein accessionYP_003390328 
Protein GI284040398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTACG GATATTTCAA CGGTACCATC GCCCCTACCG ACCAGCTTGC GGTTGGCATC 
ACCGACCTCG GCCTTTTGCG GGGCTATGGC CTATTTGATT ACTTCCTGAC GTACAACGGA
CGACCGTTCC AGTGGGATTG GTACTGGGCA CGATTTCAGA ACTCGGCCTC CCGCATGCAC
CTGAAACTGC CGCTGGGCAA AGACGAAACG TATGCGATTG TCATGAAACT GGTGGAACGC
AGTAACGAAG CGATCAGCAA AACCGGGAAG GCTACACCAA CCGACGTTGG TATTCGATTT
GTGTTGACGG GTGGTTATTC AGCAGACAGT ATCAGCGTAG AGAAGCCCAA TCTGCTTATC
CTGGCCGAAA TGATTCATCC GGTTCCGGCC ATTCAGTATG AGCAGGGGAT AAAAGTGATT
CTGGATGAGT ATGTTCGGGA AATGGCCGAA GTAAAAAGTA CTGACTACAA ACGTGTGATT
CTGATGGCCG AAGCCATTCG GGCCGCTCGT GCGTCGGACA TATTGTACCA GAAAGGGGGC
GAAATCAGCG AACTGAGCCG GAGCAATTTC TTTATCGTCA AAGGCGAAAA AATCAGTACA
CCAGACCGGC ATATTCTGCA CGGTATTACG CGAAAAACCG TGATGCAACT GGCTCAAAGT
GACTTCCAAG TTGAAGAACG ACCGGTACTT CTTTCCGAGC TTTACGACGC CGATGAAGCC
TTTACCACCA GTTCAACCAA GAAAATACTG CCCATCACCC AGATCGGTGA ACTGACCATT
GGTGACGGGC ATGTTGGTCC TAAATCAAAG TTTCTGCTGG AACGGTTCGA TGAACTGGTT
AAGACCTGGT AA
 
Protein sequence
MFYGYFNGTI APTDQLAVGI TDLGLLRGYG LFDYFLTYNG RPFQWDWYWA RFQNSASRMH 
LKLPLGKDET YAIVMKLVER SNEAISKTGK ATPTDVGIRF VLTGGYSADS ISVEKPNLLI
LAEMIHPVPA IQYEQGIKVI LDEYVREMAE VKSTDYKRVI LMAEAIRAAR ASDILYQKGG
EISELSRSNF FIVKGEKIST PDRHILHGIT RKTVMQLAQS DFQVEERPVL LSELYDADEA
FTTSSTKKIL PITQIGELTI GDGHVGPKSK FLLERFDELV KTW