Gene Slin_5558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5558 
Symbol 
ID8729332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6767564 
End bp6767977 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content49% 
IMG OID 
Productprotein of unknown function UPF0054 
Protein accessionYP_003390323 
Protein GI284040393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGTT TTTTCAACGA GGACGTTCCC TATAAGCTTC CTCAAAAGCA GGCAATCCGC 
CAATGGCTGA AGCAGCAAAC CGAAGCCGAA GGCTACTCGG TAGGCGATCT GAATTACATG
TTCTGTTCCG ATGAGTACCT GCTACAGGTT AACCGGGATT ATCTACAACA CGACTATTAC
ACGGACATTA TCACCTTCGA CATGAGCGAA GAAGAGGGTA AGATAGAAGG TGACGTTTTC
GTCAGCGTGG AACGTGTTAT TGACAACGCC AATAAGCTGG CTGTTCCGGC CGAGCAGGAA
ATGCGCCGTG TACTGGCGCA TGGCTTATTA CACCTGTGCG GTTATGGGGA TAAAACCGAC
GAGGAAGCGG CTCTAATGCG CCTTAAAGAA GACGAGTGGA TAAGTCGGTT GTAA
 
Protein sequence
MIRFFNEDVP YKLPQKQAIR QWLKQQTEAE GYSVGDLNYM FCSDEYLLQV NRDYLQHDYY 
TDIITFDMSE EEGKIEGDVF VSVERVIDNA NKLAVPAEQE MRRVLAHGLL HLCGYGDKTD
EEAALMRLKE DEWISRL