Gene Slin_5556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5556 
Symbol 
ID8729330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6765673 
End bp6766404 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390321 
Protein GI284040391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG TTACTAACCG ACCTGAAGCG ACGCCTTCGG AGGTTGCAGC AGCCAGCCGC 
CGGTCGTTTC TTCGAGTAGC GGGAGCAGCA GCCGTAACCG GTGGTCTGCT ATCTGCCTGC
TCAAACGCAG ATCAAACAGC TATTACACCC GGTGGCAGTG CCCGTGCAGC GGGTCCAATG
GTTGCCTTAC CAACCGGCGA TGTGGGTATC CTGGCGTTTG CCTATGTGCT CGAACAGTTG
GAAGCCGCCT TCTACGAAAT GATTCTGGCG AAACCGTATC CAAACATGTC CTCGACAGAT
AAGCAGCTTT GGGCAGACAT TGGGGGCCAC GAAATTATTC ACCGTGCGCT TTTCAAAGCC
GCTGTGGGAA GTGCCGTTCC AGATTTAACG TTCAACTTCT CAAGCATCGA CTTCAATAAC
CGCGCCGATG TGTTGATTCA TGCCGAAGCG TTTGAAAAGA CGGGCGTTGG TGCCTACAAC
GGTGCTGGTA AGTACATCAA GAATGCGGAT TACCTGACCT TAGCCGGTAA GATTGTATCA
GTTGAGACGC GCCACCACTC CATTATCCGC GAACTGCAAT ACCCGCACTC CGATGCGTTT
GCCGGTCCAT CCATCGTGAC TAGCGATACG GGTTTACACC TTGCTTACGA GCCAACGTTT
GTGCTGCCTA TCGCACAGAA ATACATCAAT GAAACACTCG ACGCAAGCGC ATTAGTAGCC
AGCCTCGCCT AA
 
Protein sequence
MENVTNRPEA TPSEVAAASR RSFLRVAGAA AVTGGLLSAC SNADQTAITP GGSARAAGPM 
VALPTGDVGI LAFAYVLEQL EAAFYEMILA KPYPNMSSTD KQLWADIGGH EIIHRALFKA
AVGSAVPDLT FNFSSIDFNN RADVLIHAEA FEKTGVGAYN GAGKYIKNAD YLTLAGKIVS
VETRHHSIIR ELQYPHSDAF AGPSIVTSDT GLHLAYEPTF VLPIAQKYIN ETLDASALVA
SLA