Gene Slin_5554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5554 
Symbol 
ID8729328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6763844 
End bp6764764 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content52% 
IMG OID 
ProductPfkB domain protein 
Protein accessionYP_003390319 
Protein GI284040389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAC TTACCGTTGG TTCCGTAGCG TTCGATGCGC TGGAAACCCC GTTCGGCAAA 
ACCGACAAAA TCATTGGTGG TGCCGCTACA TACATTACTC TGTCGGCGTC GTACTTCGTA
GAAAAAAACA ATCTGGTGGC GGTCGTTGGC GACGACTTCC CTCAGTCCAT GATTGACGAC
CTTCATCAGC ACGGCATTAA TACCGATGGG CTGGAAATTC GGCAGGGGGA GAAGACCTTC
TTCTGGTCGG GGAAGTACCA CAACGACATG AATAGCCGCG ATACGGTTGA GGTACAGCTA
AACGTGATGG AGCATTTCAA TCCCATCATT CCGGATTCGT ATCAGGACTG CGACTACCTG
ATGCTGGGTA ACACGGCCCC GGCCATTCAG CAGATGGTGA TCGAACGGTT GCACAAGCGG
CCCAAACTCA TTGTGCTCGA CACCATGAAC CTCTGGATCG AAATTGCCAA CCCGGATTTG
ATGAACCTGC TCAAGCTGGT CGACGTGCTG GTTGTCAATG ATGAAGAGGC CCGCCAGCTT
ACCCGCGAGT ACTCACTGGT GAAAGCAGCG GCTAAAATCC GGTCTTTAGG ACCGCAAACG
GTTATCATCA AAAAAGGCGA GCACGGCGCG TTGCTATTCA GCGAAGGCCA GATCTTCTTT
GCACCCGCCC TACCCCTCGA AGAGGTGTTC GATCCAACCG GCGCGGGCGA TACGTTTGCC
GGAGGCTTCA TCGGTCACTT AGCCAAAACC GACGATATCT CGTTCGAGAA CATGAAGCGG
GCCATTATTT ACGGGTCGGC CATGGCGTCG TTCTGTGTCG AAAAATTCGG TGCTGAGCGA
ATTATGAACC TGACGCAGGA AGAAATTCAG GCGCGGGTAA GTGAGTTCGT TACGCTATCA
GCGTTTGGAT TAGACTTATA A
 
Protein sequence
MSLLTVGSVA FDALETPFGK TDKIIGGAAT YITLSASYFV EKNNLVAVVG DDFPQSMIDD 
LHQHGINTDG LEIRQGEKTF FWSGKYHNDM NSRDTVEVQL NVMEHFNPII PDSYQDCDYL
MLGNTAPAIQ QMVIERLHKR PKLIVLDTMN LWIEIANPDL MNLLKLVDVL VVNDEEARQL
TREYSLVKAA AKIRSLGPQT VIIKKGEHGA LLFSEGQIFF APALPLEEVF DPTGAGDTFA
GGFIGHLAKT DDISFENMKR AIIYGSAMAS FCVEKFGAER IMNLTQEEIQ ARVSEFVTLS
AFGLDL