| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5552 |
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| Symbol | |
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| ID | 8729326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6760901 |
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| End bp | 6762400 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_003390317 |
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| Protein GI | 284040387 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCAC TTCAGTTATA CAATACGCTT TCCCGCAAAA AAGAACCGTT CGTAGCGCTC
AATGCGCCGT ATGTGGGTAT GTATGTTTGC GGCCCCACGG TGTACAACTA CGTTCACCTG
GGCAATGTCC GCACCTTTCT GACCTTCGAT ACGCTGTATC GGTACCTGAC GTTCATCGGC
TACAAAGTCC GCTATGTTCG CAACCTGACC GACGTAGGCC ACCTCGTGGG CGATGGCGAT
GATGGTGAAG ATAAAATTGG CCGCATGGCC AAGCTCGAAA AAGTAGAACC GATGGAAATT
GTTCAGCGGT TTACCAACGA TTTCCATACG GTGATGGCGC AGTTCAACAC CTTCCCACCA
AGCATCGAAC CCACGGCCAC CGGCCACATG GTCGAGCAGA TCGAAGCGGT ACAGACCTTA
CTCGCTAACG GGCTGGCTTA CGAGTCTAAC GGATCAGTTT ACTTTGACAT TGACACCTAC
AACAAACGGG GCGGCAACTA TGGAAAACTA TCAGGCCGTA TTCTGGACGA TCTGTTGAAC
GAAACCCGCG AGCTGGACGG CCAGTCCGAG AAACGCAGTC CGCTGGATTT TGCCATCTGG
AAACGAGCCG CTCCCGAACA CCTCATGCGC TGGAATTCGC CCTGGGGCGA AGGCTTTCCG
GGCTGGCACC TGGAGTGTAC CTGCATGAGC ACGAAATACC TGGGCAAGCA ATTCGACATT
CACGGTGGCG GTATGGACCT CAAGTTCCCG CACCACGAAT GCGAAATTGC GCAGGGCGAC
GGCCTCACCG GCGTCGACCC GGTTCGGTAC TGGATGCACT CGAACATGCT GACGGTGAAT
GGACAGAAAA TGTCGAAGTC GCTGGGTAAC TCCTTCCTGC CTGCCGAGCT TTTTGCCGGT
AGCCACCCCC TGCTCGACCA GCCGTACAGC CCCATGACGG TGCGTTTTTT CATGCTCCAA
TCGCACTACC GAAGCACCCT CGACTTCTCG AACGATGCGT TAAAAGCGGC TCAAAAAGGC
TATCGGCGGT TGGCGAATGG CCTGCGAGTC ATCAAAACGC TGTCGTATCC GTCGGATGCA
GAAGCAGAAA ACGGCGTGGC AGTTGACGAG GCTAAACAGA AGGAGATTCA GAAGGCTGTT
CAGCAGTTTT ACGATGCGAT GAACGACGAC CTAAATACGG CCGTAGCCAT TGCCCAGCTG
TTTACGCTGT TGAAGTACGT TAATATGCTG TATTTGAACC AGCTTCAGGC GGCCGTTCTT
GGCGAAGAAA CGTTCAATCT TCTGAAAGAG TCGTTTGTAA CATTCATGCA GGATGTACTC
GGTTTGCTCG AAGAAGGAGC TACCAACCAA CCTGTTCTGG AAGGGCTGTT AACACTTTAT
AAGGAGTACA AGGAGCAACG GCAATACGAC AAGGTGGACC AGATTCGTTC GTACTTTAAA
GCACAGGGAC TGGCTATCAA AGACATGAAA CACCAGATCG ACTGGGCGTA CGAAGAATAA
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| Protein sequence | MQPLQLYNTL SRKKEPFVAL NAPYVGMYVC GPTVYNYVHL GNVRTFLTFD TLYRYLTFIG
YKVRYVRNLT DVGHLVGDGD DGEDKIGRMA KLEKVEPMEI VQRFTNDFHT VMAQFNTFPP
SIEPTATGHM VEQIEAVQTL LANGLAYESN GSVYFDIDTY NKRGGNYGKL SGRILDDLLN
ETRELDGQSE KRSPLDFAIW KRAAPEHLMR WNSPWGEGFP GWHLECTCMS TKYLGKQFDI
HGGGMDLKFP HHECEIAQGD GLTGVDPVRY WMHSNMLTVN GQKMSKSLGN SFLPAELFAG
SHPLLDQPYS PMTVRFFMLQ SHYRSTLDFS NDALKAAQKG YRRLANGLRV IKTLSYPSDA
EAENGVAVDE AKQKEIQKAV QQFYDAMNDD LNTAVAIAQL FTLLKYVNML YLNQLQAAVL
GEETFNLLKE SFVTFMQDVL GLLEEGATNQ PVLEGLLTLY KEYKEQRQYD KVDQIRSYFK
AQGLAIKDMK HQIDWAYEE
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