| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5521 |
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| Symbol | |
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| ID | 8729289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6721496 |
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| End bp | 6723319 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | |
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| Product | Tetratricopeptide repeat protein |
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| Protein accession | YP_003390286 |
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| Protein GI | 284040356 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0375374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.605341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAATAA GGTCAAAAGT CATTATTGGG CTGTTATGGG TTTTGTCTGC CGGACTTACC
TGGGCGCAAG TTGGCCCCAC ATCGGGCGGA GCGACGCTGG CCGAAGAGTA TTATAAAGCT
GGGGACTTCG CAAAGGCTGC GAATGAATAT GCGAAGTTGT TGAAGACTGA TGTGAACTGG
ACGAAACTTT CCAGGTATGT GTATAGCCTC CAAAAAAGTA ATAAGACCGA AGACGCAATA
AAATTTTTAC GCAAGCAGCA GCGTAGCGAC GAAGCCAACC GATCCTACTA CGAGTTGTTG
AGTGGTCAGT TGGCCACGCA ACAGGGCGAT ACCACACAGG CAAAAGCTCA ATTTACGGCC
GCCGTACAAT CGAGCCGATC GTCAATCGCC AAGCTCGAAA AACTTGCAGC TGCCTTCAGC
GAGGTAGGAG AGAGCCGCTG GGCTATCCGA ACACTCGAAA CTGCCCGGGA AGTCAGTAAA
GAGCAAACGG CCTACAGTGA GGAGTTAATG ACGCTGTATC GGTCGACAGG GCAAACCGAA
AAAGCCATCG ACGAAATTAT TCTGACTGGA AAGCAACCTG AAAAGAAAGA GACCGTTTTA
GCCGCTTTGC AAGGGTTTAT CAACACCAAA GATGAACCCC TTGTGGAAAA AGCACTTTAT
TCCAAAATTC AGCAGGAACC GAACGAGTTG TCGTACAATG AACTACTGAT TTGGTATTTT
GTCCAGAAGC AAAAATTTAG CCGTGCCCTG CTACAGGAAA AAGCAACCGA CAAACGGCTG
AAATTAAACG GGAGCCGGGT GTATGATTTA GGGATGCTGG CCATGAACAA TAAAGAATAC
AAAACAGCAG CTGAGTCATT CGAGTATGTA TCCACAACAT ATCCACAAGG ACAACTCTAC
CCGTTTGCGC GCCGATTGGT CATTAGTGCG CGGGAAGAAC AGGTAAAGAA TACTTACCCG
GTTGATAAGT TAGAGATTAG AAAGCTTATT AGCGATTATC AAAAAATGCT TCAGGAGATC
GGTACGAATA GCAAAACACT CGAAGCATTG CGTAGTACTG CCAATCTATA TGGCAATTAT
CTGGATAGTA AGGATACCGC ATTGACTGTA CTTGATCTGG CTATCGATTT AGGTAAAACC
GATAAAAATT TTGTTGATCG CTGCAAGCTG GATAAGGGCG ACATCTACCT CCTGAAGGGA
GAGCCCTGGG AATCAACATT GCTGTATTCA CAGGTTGAGA AGTCACAAAA GGAGGAATTA
CTAGGCTACG AAGCAAAGCT CAAAAATGCA AAGCTCCAAT ATTACCGGGG TAATATGGCT
GTCGCGAAGG ATCTACTGGA TGTGCTTAAA CTGGCCACTT CCCGCGAAAT TGCTAATGAT
GCCGAGCAGT TAAGTTTATT GATTGTGGAT AACACGGGCT TAGACAGTAC AGAAGCTGCC
ATGCGACACT ATGCAGATAT CGATTTGATG CTATTCCAGA ACAAAACAGA AGAAGCCGTT
CTAGAACTAA ATAAGATGTT GAAAACCTAC CCAGAACATA GCCTCGTGGA TGAGATTCTA
TGGCTGCGAG CAAATACCTT TTTGAAACAG GGAAAGAATG CGGAAGCGTT AGAAGACCTC
AAAAAAATTG TTGCTTCTTA TCCGAACGAC ATACTTGGCG ATGATGCCCA ATTTATGCAA
GGGAAAATCT ATGAAGACCG GTTGAAAGAT AAACAAGCAG CAATGGAAGC TTACCAAAAA
GTCTTAACAC AATATCCGGG TAGTATCTAT GGAGCCGAAG CACGTAAACG CTTCCGTGCG
TTGAGAGGAG ATACCTTGAA TTAG
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| Protein sequence | MLIRSKVIIG LLWVLSAGLT WAQVGPTSGG ATLAEEYYKA GDFAKAANEY AKLLKTDVNW
TKLSRYVYSL QKSNKTEDAI KFLRKQQRSD EANRSYYELL SGQLATQQGD TTQAKAQFTA
AVQSSRSSIA KLEKLAAAFS EVGESRWAIR TLETAREVSK EQTAYSEELM TLYRSTGQTE
KAIDEIILTG KQPEKKETVL AALQGFINTK DEPLVEKALY SKIQQEPNEL SYNELLIWYF
VQKQKFSRAL LQEKATDKRL KLNGSRVYDL GMLAMNNKEY KTAAESFEYV STTYPQGQLY
PFARRLVISA REEQVKNTYP VDKLEIRKLI SDYQKMLQEI GTNSKTLEAL RSTANLYGNY
LDSKDTALTV LDLAIDLGKT DKNFVDRCKL DKGDIYLLKG EPWESTLLYS QVEKSQKEEL
LGYEAKLKNA KLQYYRGNMA VAKDLLDVLK LATSREIAND AEQLSLLIVD NTGLDSTEAA
MRHYADIDLM LFQNKTEEAV LELNKMLKTY PEHSLVDEIL WLRANTFLKQ GKNAEALEDL
KKIVASYPND ILGDDAQFMQ GKIYEDRLKD KQAAMEAYQK VLTQYPGSIY GAEARKRFRA
LRGDTLN
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