Gene Slin_5475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5475 
Symbol 
ID8729243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6661772 
End bp6662581 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content53% 
IMG OID 
ProductIndole-3-glycerol-phosphate synthase 
Protein accessionYP_003390240 
Protein GI284040310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.615379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC TTGACCAGAT CATTGCCCAG AAGCGCATCG AAGTAGCCGA GCGCAAAGCC 
ATCACCACCA TTCAGGCGCT GGAACAAATG CCCGACTTTC GACGGGAAAC CCTGTCGGCA
CGGGATGCCA TTCAGGATTT ACACTCGACG GGCATCATTG CCGAGTTCAA ACGTAAATCG
CCTTCCAAAG GTATCATCAA CGACCGGGCC GACGTCGCCA CCACTACGCA GGGCTACGTA
AAATCGGGAG CCGCCGTATT GTCCGTTCTA ACCGACGAGC CGTTTTTTGG CGGTACATCC
GCCGATTTAC AGGCCGCCCG GCTCGCTAAT CCCGGAACGC CGATTCTTCG TAAAGACTTT
ATCGTTGACC GCTACCAACT GATCGAAGCC AAAGCCTGGG GTGCCGATGT GGTGCTATTG
ATTGCGGCCT GCCTGACACC TGAGGAAATT ACGGAACTCA GTATGCAGGC GCACGATTTG
AGCCTGCAGG TGTTGCTGGA AGTACACGAC GAGGAGGAGC TCGACCGCTC TCTGAATTAT
AACATCGATC TGGTGGGCGT TAATAACCGC GACCTCAAAA CGTTTACCAC ATCCATAGAA
ACGTCGCTGC GATTGATTGA TAAAATTCCG GACACCTTCG CCAAGATTAC CGAAAGCGGT
TTGCACGATG CAGATACCAT GCTGACGCTG TTCCGGGCGG GATTCGACGG TTTTTTGATT
GGCGAAGCGT TCATGAAAAC GGACGACCCA GCCAAAGCCC TCGCTGATTT AGTTACGCAA
TACTCCATCA ATAACACACT AACGCTTTAA
 
Protein sequence
MTILDQIIAQ KRIEVAERKA ITTIQALEQM PDFRRETLSA RDAIQDLHST GIIAEFKRKS 
PSKGIINDRA DVATTTQGYV KSGAAVLSVL TDEPFFGGTS ADLQAARLAN PGTPILRKDF
IVDRYQLIEA KAWGADVVLL IAACLTPEEI TELSMQAHDL SLQVLLEVHD EEELDRSLNY
NIDLVGVNNR DLKTFTTSIE TSLRLIDKIP DTFAKITESG LHDADTMLTL FRAGFDGFLI
GEAFMKTDDP AKALADLVTQ YSINNTLTL