Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5469 |
Symbol | |
ID | 8729236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6654441 |
End bp | 6656021 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | Gluconate 2-dehydrogenase (acceptor) |
Protein accession | YP_003390234 |
Protein GI | 284040304 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAT ACGCAACTAC AGAAACCGTT GACGCGGTCA TTATCGGGAC CGGAGCCGGT GGGGCTCCCC TGCTGGCCCG ACTGGCGAAA GCCGGCCTGA GCGTCGTGGC GCTCGAAGCT GGTAAACACT GGAACCCGTC CCGTGATTTT GCCACCGATG AGAAGTCGCA GGAAAAGCTG TTCTGGAACG ACGAACGGCT TAGTGCGGGC AATGATCCGC TGCCTTTTGG CAGTAACAAT TCAGGTACCG GTGTTGGCGG TTCTACACTG CACTATACAG CCTACACGCC CCGCGCCCAA CCCGATGATT TCCAGCTCCA TACTGATTTC GGCGTAGGGG TCGATTGGCC GATTGGTTTA GACCAGATCG AACCGTATTA CGAAGAGGTC GAGCAGTTTC TGGGCGTTTC GGGTCCTGCT CACTATCCGT GGGGTCCATC CCGCAACCGG TCGTATGCAC TGGGGCCGCT GCCCATTAAC GGGGCGGGTC AACTGATGGA ACGAGGGTGT AAAGAAGTGG GCATTAAAAC ATCACCAGCG GCCAATGCGG CCCTGTCGGC GGGGTATTAT CAGGAAGGCG TTGGACACCG GCCCGCCTGT GCTAACCGAG GATTCTGCCA GGCGGGGTGT AACATCGGAG CAAAGGCCAG CATGGACGTT ACGTATCTGC CGCTGGCCAT TCATTACGGG GCCGAAATCC GCCCGGAGTG CTTTGTGACA CAATTGGTAA AATCGTCGTC CGGTAAAATT AGTGAAGTTG TCTACATCCA CAACGGGCAG GAAATACGAC AGCGATGCCG GTACGTGTTC CTCTGCGCGG GCACTATTGA AACCGCTCGT CTTCTCTTGT TGAACGACTT AGCGAACAGC AGCGGGCAGG TTGGCCGTAA CGTGATGGCG CACCCCGGCC TACAGATTTG GGGCGAGTTT GCCGAAGACG TCCGCCCCTA CAAAGGCATC CCCGGTGCGC TGATTTCGGA AGATACGCAC CGCCCCAAAG ACAACACTGG CGGTCCGGTC GATTTCGCAG GAGGCTATCT TCTTCAGTCC ATCGGTGTAA TGCCCGTTAC CTACATGACC CAGATGGCGC GGGGCCGGGG GCTGTGGGGA CAGGAGTTGA AACGGGCCGC GCTGGCGTAT AACCACGTGG CGGGTATCAA CATCCTCGGC GACTGCCTGC CCTACGACCA CAATTACCTT GAATTATCGA ACGAGAAAGA CATCCGTGGC TTACCCAAAC CGCGTATCTA TTTCACCAAC GGCGAAAACG AAAAACGGAT GACCGCCCAC GCCGACAAGA TCATGCGCGA CATCTGGACG GCTGCGGGAG CCAAAAACAT CTGGGCTTTT CAGCGAAATG CCCACGTCAT TGGCACCTGC CGCATGGGCA ACGACCCCGA AACAGCCGTC GTCAACGCCA ACGGGCAATC GTTCGACATT CCGAATCTAT ACATCAGTGA CAACTCAACC TTTCCCAGTG CCCTGAGCGT GAACCCCGCC CTGACGATTA TGGCGCTGGC GCTGAGAACG GCGGATCGGT TTTTAAGTAC TGCGGGTGGA AACCCCCGAT CTGTTCAATA A
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Protein sequence | MNTYATTETV DAVIIGTGAG GAPLLARLAK AGLSVVALEA GKHWNPSRDF ATDEKSQEKL FWNDERLSAG NDPLPFGSNN SGTGVGGSTL HYTAYTPRAQ PDDFQLHTDF GVGVDWPIGL DQIEPYYEEV EQFLGVSGPA HYPWGPSRNR SYALGPLPIN GAGQLMERGC KEVGIKTSPA ANAALSAGYY QEGVGHRPAC ANRGFCQAGC NIGAKASMDV TYLPLAIHYG AEIRPECFVT QLVKSSSGKI SEVVYIHNGQ EIRQRCRYVF LCAGTIETAR LLLLNDLANS SGQVGRNVMA HPGLQIWGEF AEDVRPYKGI PGALISEDTH RPKDNTGGPV DFAGGYLLQS IGVMPVTYMT QMARGRGLWG QELKRAALAY NHVAGINILG DCLPYDHNYL ELSNEKDIRG LPKPRIYFTN GENEKRMTAH ADKIMRDIWT AAGAKNIWAF QRNAHVIGTC RMGNDPETAV VNANGQSFDI PNLYISDNST FPSALSVNPA LTIMALALRT ADRFLSTAGG NPRSVQ
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