Gene Slin_5469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5469 
Symbol 
ID8729236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6654441 
End bp6656021 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content57% 
IMG OID 
ProductGluconate 2-dehydrogenase (acceptor) 
Protein accessionYP_003390234 
Protein GI284040304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAT ACGCAACTAC AGAAACCGTT GACGCGGTCA TTATCGGGAC CGGAGCCGGT 
GGGGCTCCCC TGCTGGCCCG ACTGGCGAAA GCCGGCCTGA GCGTCGTGGC GCTCGAAGCT
GGTAAACACT GGAACCCGTC CCGTGATTTT GCCACCGATG AGAAGTCGCA GGAAAAGCTG
TTCTGGAACG ACGAACGGCT TAGTGCGGGC AATGATCCGC TGCCTTTTGG CAGTAACAAT
TCAGGTACCG GTGTTGGCGG TTCTACACTG CACTATACAG CCTACACGCC CCGCGCCCAA
CCCGATGATT TCCAGCTCCA TACTGATTTC GGCGTAGGGG TCGATTGGCC GATTGGTTTA
GACCAGATCG AACCGTATTA CGAAGAGGTC GAGCAGTTTC TGGGCGTTTC GGGTCCTGCT
CACTATCCGT GGGGTCCATC CCGCAACCGG TCGTATGCAC TGGGGCCGCT GCCCATTAAC
GGGGCGGGTC AACTGATGGA ACGAGGGTGT AAAGAAGTGG GCATTAAAAC ATCACCAGCG
GCCAATGCGG CCCTGTCGGC GGGGTATTAT CAGGAAGGCG TTGGACACCG GCCCGCCTGT
GCTAACCGAG GATTCTGCCA GGCGGGGTGT AACATCGGAG CAAAGGCCAG CATGGACGTT
ACGTATCTGC CGCTGGCCAT TCATTACGGG GCCGAAATCC GCCCGGAGTG CTTTGTGACA
CAATTGGTAA AATCGTCGTC CGGTAAAATT AGTGAAGTTG TCTACATCCA CAACGGGCAG
GAAATACGAC AGCGATGCCG GTACGTGTTC CTCTGCGCGG GCACTATTGA AACCGCTCGT
CTTCTCTTGT TGAACGACTT AGCGAACAGC AGCGGGCAGG TTGGCCGTAA CGTGATGGCG
CACCCCGGCC TACAGATTTG GGGCGAGTTT GCCGAAGACG TCCGCCCCTA CAAAGGCATC
CCCGGTGCGC TGATTTCGGA AGATACGCAC CGCCCCAAAG ACAACACTGG CGGTCCGGTC
GATTTCGCAG GAGGCTATCT TCTTCAGTCC ATCGGTGTAA TGCCCGTTAC CTACATGACC
CAGATGGCGC GGGGCCGGGG GCTGTGGGGA CAGGAGTTGA AACGGGCCGC GCTGGCGTAT
AACCACGTGG CGGGTATCAA CATCCTCGGC GACTGCCTGC CCTACGACCA CAATTACCTT
GAATTATCGA ACGAGAAAGA CATCCGTGGC TTACCCAAAC CGCGTATCTA TTTCACCAAC
GGCGAAAACG AAAAACGGAT GACCGCCCAC GCCGACAAGA TCATGCGCGA CATCTGGACG
GCTGCGGGAG CCAAAAACAT CTGGGCTTTT CAGCGAAATG CCCACGTCAT TGGCACCTGC
CGCATGGGCA ACGACCCCGA AACAGCCGTC GTCAACGCCA ACGGGCAATC GTTCGACATT
CCGAATCTAT ACATCAGTGA CAACTCAACC TTTCCCAGTG CCCTGAGCGT GAACCCCGCC
CTGACGATTA TGGCGCTGGC GCTGAGAACG GCGGATCGGT TTTTAAGTAC TGCGGGTGGA
AACCCCCGAT CTGTTCAATA A
 
Protein sequence
MNTYATTETV DAVIIGTGAG GAPLLARLAK AGLSVVALEA GKHWNPSRDF ATDEKSQEKL 
FWNDERLSAG NDPLPFGSNN SGTGVGGSTL HYTAYTPRAQ PDDFQLHTDF GVGVDWPIGL
DQIEPYYEEV EQFLGVSGPA HYPWGPSRNR SYALGPLPIN GAGQLMERGC KEVGIKTSPA
ANAALSAGYY QEGVGHRPAC ANRGFCQAGC NIGAKASMDV TYLPLAIHYG AEIRPECFVT
QLVKSSSGKI SEVVYIHNGQ EIRQRCRYVF LCAGTIETAR LLLLNDLANS SGQVGRNVMA
HPGLQIWGEF AEDVRPYKGI PGALISEDTH RPKDNTGGPV DFAGGYLLQS IGVMPVTYMT
QMARGRGLWG QELKRAALAY NHVAGINILG DCLPYDHNYL ELSNEKDIRG LPKPRIYFTN
GENEKRMTAH ADKIMRDIWT AAGAKNIWAF QRNAHVIGTC RMGNDPETAV VNANGQSFDI
PNLYISDNST FPSALSVNPA LTIMALALRT ADRFLSTAGG NPRSVQ