Gene Slin_5422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5422 
Symbol 
ID8729189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6596295 
End bp6596918 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390188 
Protein GI284040258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTTCGC CAGATCTTTT ATCCCTCACA TACCGTCGGC TTGAGGGAGC TGCGTTTCGG 
ACGGTTTTCG ACGATTTAGC GGCCCTGCGT ATTGCGGTAT TCTACGACTT CCCGTATTTG
TACGAGGGGT CAATGGCGTA CGAGAAGAAC TATCTGGAAA CCTACGCCCG CTCCGAACGT
GCTTTTTTGT TCGCCGTTTA CGATGGCAAC CAAATGGTTG GCGCTACAAC GGCCATTCCT
CTGCCTGACG AAGCCCCTGA AGTGCAGATG CCTTTCCAAA AGGCGGGATA CGAGCTCGAT
ACGGTCTTTT ATTTTGGGGA GAGTGTCCTG TTGCCTGCCT ACCGGGGGCT GGGCCTCGGG
AATCGCTTCT TCGATGAGCG CGAAGCCCAT GCCCAAAAAT TTGCACAGTG TACAATGACC
TGTTTCTGCG CCGTGCAACG TCCCGAAGAC CATCCGCTGC GTCCGGCCGA CTATCGGCCC
CTCGACGAAT TCTGGCAAAA GCGCGGTTAC CAGCGAGATA GCAGTCTGCA AAGTGAAATG
ATCTGGCCAG ACCGCAACGA AACCGTAGAA ACGGCCAAAA CCATGATTTA CTGGACAAAG
AAACAGGTAG TTAAAAAAGC CTAA
 
Protein sequence
MSSPDLLSLT YRRLEGAAFR TVFDDLAALR IAVFYDFPYL YEGSMAYEKN YLETYARSER 
AFLFAVYDGN QMVGATTAIP LPDEAPEVQM PFQKAGYELD TVFYFGESVL LPAYRGLGLG
NRFFDEREAH AQKFAQCTMT CFCAVQRPED HPLRPADYRP LDEFWQKRGY QRDSSLQSEM
IWPDRNETVE TAKTMIYWTK KQVVKKA