| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5402 |
|---|
| Symbol | |
|---|
| ID | 8729169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6570892 |
|---|
| End bp | 6572187 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003390168 |
|---|
| Protein GI | 284040238 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGA ACAAACCTCT CGAATCGCTG AACGTTCTCA GTTTCAAAGG TGTGCAGATG
CGGACCTTCC ACATTACCTG GCTCACTTTC TTTGTGTGTT TCTTCGGCTG GTTTGGGCTG
GCTCCGCTGA TGCCCGCCAT CCGGGCCGAT CTGGGGCTGA CCAAACCGCA GGTCGGCAAT
ACAATCATTG CCGCCGTGTC AGCTACCATT CTGGCCCGTC TGGTCATTGG CCGCCTGTGC
GACACCTGGG GACCACGTAA GACCTACACG GCGTTGCTGT TGTTGGGCTC GCTGCCCGTT
ATGTTCGTTG GTCTGGCACA TGATTACACC ACCTTTCTGC TATTCCGACT GGCGATTGGC
GTCATTGGCG CGTCGTTCGT GATCACGCAG TTTCATACAT CCATGATGTT TGCCCCGAAG
ATCAAAGGTA CGGCCAACGC TGTAGCCGGT GGCTGGGGCA ACCTCGGTGG CGGTATTACT
CAACTGGCGA TGCCGCTCAT CATGGCGACC ATCGTTGGTT TCGGCTACAC CAAGCCCGAA
GCGTGGCGGC TGGCCATGAT CGTACCGGGT GTGCTAATGC TTGTGATGGC CTTCATTTAC
TACCGCTTTA CCCAGGATAC ACCCGCTGGC AATTATGGTG ATATAGAGAG GTCGATTACC
AAGGGCGAGA AAGTAAGTTT CTGGGCGGCC TGCGCCGATA TCCGCGTATG GGCGCTGGCA
CTGGCTTATG CCTGCTGCTT CGGGATGGAG ATTACGTTCG ATGGCGTGGC CGCGCTTTAT
TTCTTCGATA ACTTCAAGCT GGCCGAAACG GAAGCCGGTT TCTGGGCCAT GCTTTTCGGT
GGCATGAACA TTTTTGCCCG TGCGCTCGGC GGTATCGTGG CCGATAAAGT CGGGAATAAA
TATGGTATGC GGGGCAAAGG TATTCTGCTG GCGGGTATGC TGGTGCTGGA AGGAGCGGGC
ATTATGCTTT TCGCGCAGGC CGGTAGCCTG CCAATGGCTA TCATGTCCAT GATCACCTTC
GCGTTGTTCC TGAAAATGTC GAATGGCGGT ACGTATGCCA TTGTGCCGTT CGTGAACCCC
AAAGCTGTGG GCGTCATTTC GGGCGTAGTT GGTGCAGGCG GAAACCTCGG CGGTATGCTG
ATGGCCTTCC TCTTCAAATC GCAGTCCATC ACCTACGGAC AGGCGTTTCT ATACATCGGC
TGCGCCGTAG CCGCCATTGG ATTGCTCTTA TTCCTGGTCA ATTTCAGCAA AGAGACCGTC
GCCGAATCAG CGGAAGTGGA ATTGCAAACA GCTTGA
|
|---|
| Protein sequence | MQTNKPLESL NVLSFKGVQM RTFHITWLTF FVCFFGWFGL APLMPAIRAD LGLTKPQVGN
TIIAAVSATI LARLVIGRLC DTWGPRKTYT ALLLLGSLPV MFVGLAHDYT TFLLFRLAIG
VIGASFVITQ FHTSMMFAPK IKGTANAVAG GWGNLGGGIT QLAMPLIMAT IVGFGYTKPE
AWRLAMIVPG VLMLVMAFIY YRFTQDTPAG NYGDIERSIT KGEKVSFWAA CADIRVWALA
LAYACCFGME ITFDGVAALY FFDNFKLAET EAGFWAMLFG GMNIFARALG GIVADKVGNK
YGMRGKGILL AGMLVLEGAG IMLFAQAGSL PMAIMSMITF ALFLKMSNGG TYAIVPFVNP
KAVGVISGVV GAGGNLGGML MAFLFKSQSI TYGQAFLYIG CAVAAIGLLL FLVNFSKETV
AESAEVELQT A
|
|---|
| |