Gene Slin_5373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5373 
Symbol 
ID8729138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6533948 
End bp6534862 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content56% 
IMG OID 
ProductNmrA family protein 
Protein accessionYP_003390140 
Protein GI284040210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.368951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA CAATAGCAGT AGCTGGTGCT ACGGGCGATC TGGGCGAACG AATTGTTAAG 
GCTTTGATAG ACCGGGGCGC CGATGTGCGC GCGCTGGTTC GCGCCAGCAG CAACAGCGCA
AAAACTAACG AACTCGAAAA AATGGGGGTT CAGATCGTCA AGCTCGGGGC GTGGACCGTC
AATGAACTAA CGGAAGCCTG CCGGGGCGTT TCCTGCGTCG TGTCGGCTCT GTCGGGCCTG
CGCGAAACGG TCATTGATGC CCAGAAAGCA CTGCTCGATG CGGCCGTGGC GGCTGGCGTT
CCTCGCTTCA TTCCATCCGA TTATTCGATT GATTTCACTA AGCTTCCGGC TGGACGAAAC
CGCAATCTGG ATTTAAGACG GGAATTTCAC GCTTATCTCG ACAAAGCACC CATTGCTGCT
ACCACCATTT TCAACGGTGC CTTTGCCGAT ATGATTACGG GGCAGATGCC CATCATTCTC
TTCAAGCTAC ACCGGGTTAT GGTTTGGGGC AATGCGGATC AGCGCATGGA CTTCACCACG
AAGGATGATA CGGCCGCCTT TACGGCGAGT GCGGCACTGG ACAACTCGAC ACCCCGCTTT
CTGCGCATCG CCGGTGATCA ACTGAGCATT CGGGAGCTGA CCGGGGTGGT AAGTGACGTA
ACCGGCGAGA AATACACTGT ATTACGGCCG GGTGGGCTGG GGGCGCTCAG CACCGTTATT
ACCATTGCCC GTTTTGTGGC CCCCGGCGGA GACGATATTT ACCCCGCCTG GCAGGGTATG
CAGTACATGC GCGATATGCT GGACGGACGG GGTAAAGCCG CAACCGTCGA CAATGATCGC
TATCCGAATC TGCACTGGCA TACCATCAAA GATGTGCTAA CCGGGTTTGT GGCGAGCGGT
GCGGCTCAGC CCTAA
 
Protein sequence
MKNTIAVAGA TGDLGERIVK ALIDRGADVR ALVRASSNSA KTNELEKMGV QIVKLGAWTV 
NELTEACRGV SCVVSALSGL RETVIDAQKA LLDAAVAAGV PRFIPSDYSI DFTKLPAGRN
RNLDLRREFH AYLDKAPIAA TTIFNGAFAD MITGQMPIIL FKLHRVMVWG NADQRMDFTT
KDDTAAFTAS AALDNSTPRF LRIAGDQLSI RELTGVVSDV TGEKYTVLRP GGLGALSTVI
TIARFVAPGG DDIYPAWQGM QYMRDMLDGR GKAATVDNDR YPNLHWHTIK DVLTGFVASG
AAQP