| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5340 |
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| Symbol | |
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| ID | 8729105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6503234 |
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| End bp | 6505678 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003390108 |
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| Protein GI | 284040178 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.640858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATA TACTACCATT TTGGTTGTGC AGCCTGCTCA TTTACTTTAT GCCGTTACAG
TCCGGCAGCG CACAGGCTTC ACTAAATACA GCGGGCAACA GTACGCAGGC AAAAGGAGTG
CGGGGTGCAG CGCTGACCAT CAGCGGCTAC ATAAAAGATG CCGGTAATGG CGAAGGGCTC
ATTGGTGTTT CTGTTTATGT GAAAGAAACA GGCACTGGCG CCGTCACGAA CAGCTATGGC
TTTTATGCCG TTACGCTCCC GGCGGGCAGT TACAACCTCG TTATCAGCTA CGTTGGCTAT
ACCCGACAAA CCCGCACGGT CGATCTTGTG GACCGGAACG TACGCCTTGA CCTCGAACTG
AGTCAGGAAG GCAAGCAGCT TCAGGAAGTG GTTGTCTCCA CCAAGCGGGA GGACGACAAT
GTGAAAAACA TTGAAATGAG CGTCAACCGG ATTGACGTGA AAACCCTGCA ACGGATTCCA
GCCCTGCTGG GCGAAGTCGA CGTGATCCGG AGCATTCAGT TGCTGCCGGG CGTATCGACG
GTGGGCGAAG GCGCTACCGG TTTCAACGTT CGGGGCGGTA GTATCGACCA GAATCTGGTG
CTGCTGGACG AAGCCCCGGT CTATAACTCC TCGCACCTGT TTGGCTTCTT CTCGGTCTTC
AACCCCGACG CGGTCAAAGA CGTGAAGCTC ATCAAAGGCG GTATCCCGGC TAATTACGGT
GGCCGAATTG CCTCTATTCT GGATGTGCGT CTGAAAGAAG GCAACGCTAA GAAACCTGAA
CTCAACGGGG GTATTGGACT TATTTTCAGC CGTTTGTCGT ACGAGCGACC GCTTTTCAAC
GGCAAAGGCT CGTTTATCGT AGCCGCCCGG CGTTCTTACG CCGACGTGCT GGCCCAGCCA
TTCCTGACGG GCGACCTGAA AGGGGCCAAG TTTTATTTTT ACGACCTGAC GGCGAAGGGT
AATTACCGCA TCAACGATAA AAACACGGTG TTTCTGTCGG GCTATCTGGG CCGCGATGTA
TTCGGGTCGG ATTTTGGGTT TAACTGGGGG AATACAACCC TGTCGGCCCG CTGGAACCAC
GTTTTCAGCG ACCGGCTTTT CCTGAACACG ACGGCCTATT ACAGTAACTA CGACTACTCG
CTCAACTCGG ACCTGAAAGG GAAACGACCC AACGATTTCT TCCGAACCGA TTCCCGGATT
GTCGACTACA GCCTGAAACC GGATTTTTCG CTGTTTTTGG GTAAAAACAC CATCACCTTT
GGCGGTCAGG TCATCGCGCA TGATTTTCAG CCCGGCACCG CAACAGCCGC CAGTTCGGGC
AGTGTCCGGA CGTTTGGCAT AGCCAGTAAA CGAGCTATGG AAGCGGCTCT TTATGTGGGC
AATGAGCAGC AGCTGACCCC GAAGCTTCAG TTGCAATACG GACTGCGCTA TTCCCTATTT
AATTATGTTG GCGAAGGCGA AGCCTATACC TTCCGCACCG ATGTGCCGCT GGGCAGTCGC
CGTGAGGTGA TTACCACCGT AGGGTATCGG GGCGGAGAGG TGATCAAGAC CTACGGCAAC
TGGGAACCCC GCTTTTCGAC CAAGCTGGAT TTGTCGGATA ACAGCTCCCT GAAATTCAGT
TATAACCGCA TGGCGCAGTA CATCCACCTG GTTTCCAATA CAACAGCCTC GACGCCACTG
GATATCTGGA CACCATCGAC CAATAATATC AAACCGCAGA TTGCCGATCA GGTTGCCGGG
GGATATTTTA AGAACTTTGG CCGCTCCAGC GGAACGGGCA GCGAATTCGA AGCCTCGGTA
GAAGTATATT ACAAATGGCT GCAGAACCAG ATTGACTACA TTGACGGGGC CAGCCTGATC
CTGAATAAAT ACCTTGAAGG TGATTTGCTG AGCGGCAAAG GCCGCGCTTA CGGTGCTGAG
TTCTATGTAA AACGAAACAC GGGCGTCGTA AACGGCTGGA TTAGCTACAC GCTGGCCAAA
ACCGAGCGGC AGGTGGACGG CATCAACAAC AATAACTGGT ACCCCACGCG CTTCGACAAG
CGACACACGC TGACATCGGT ACTGCTGTTC GACCCGCCCC ATGCCAAGCG CTGGAACTTC
TCGGCAACCT TTACGCTGGC CAGCGGAACG CCCGGCACGT TCCCCACCAA TCGCTTTGAG
TACCAGGGCT ACGTAGTGCC GCAGAATACC GACAATGCCC GGAACAATTA CCGGATTCCG
GCGTACCACC GACTCGATCT GGCGGCTACC TTGCAGGGGC GTAAACGTCC GGGTAAGCGC
AAAGACGATA ACTGGGTATT CTCGATTTAC AACGTCTATG CCCGCAAAAA CGCCTTTTCA
GTCTATTTCC AACCCAATGC AGATAGTCCC CGCGTAACGG AAGCCATTCG CTATTCAGTT
TTTGCGACCC TGATTCCGTC CGTAACGTAC AACTTTAAAT TATAG
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| Protein sequence | MKHILPFWLC SLLIYFMPLQ SGSAQASLNT AGNSTQAKGV RGAALTISGY IKDAGNGEGL
IGVSVYVKET GTGAVTNSYG FYAVTLPAGS YNLVISYVGY TRQTRTVDLV DRNVRLDLEL
SQEGKQLQEV VVSTKREDDN VKNIEMSVNR IDVKTLQRIP ALLGEVDVIR SIQLLPGVST
VGEGATGFNV RGGSIDQNLV LLDEAPVYNS SHLFGFFSVF NPDAVKDVKL IKGGIPANYG
GRIASILDVR LKEGNAKKPE LNGGIGLIFS RLSYERPLFN GKGSFIVAAR RSYADVLAQP
FLTGDLKGAK FYFYDLTAKG NYRINDKNTV FLSGYLGRDV FGSDFGFNWG NTTLSARWNH
VFSDRLFLNT TAYYSNYDYS LNSDLKGKRP NDFFRTDSRI VDYSLKPDFS LFLGKNTITF
GGQVIAHDFQ PGTATAASSG SVRTFGIASK RAMEAALYVG NEQQLTPKLQ LQYGLRYSLF
NYVGEGEAYT FRTDVPLGSR REVITTVGYR GGEVIKTYGN WEPRFSTKLD LSDNSSLKFS
YNRMAQYIHL VSNTTASTPL DIWTPSTNNI KPQIADQVAG GYFKNFGRSS GTGSEFEASV
EVYYKWLQNQ IDYIDGASLI LNKYLEGDLL SGKGRAYGAE FYVKRNTGVV NGWISYTLAK
TERQVDGINN NNWYPTRFDK RHTLTSVLLF DPPHAKRWNF SATFTLASGT PGTFPTNRFE
YQGYVVPQNT DNARNNYRIP AYHRLDLAAT LQGRKRPGKR KDDNWVFSIY NVYARKNAFS
VYFQPNADSP RVTEAIRYSV FATLIPSVTY NFKL
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