| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5267 |
|---|
| Symbol | |
|---|
| ID | 8729033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6421530 |
|---|
| End bp | 6422810 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | PKD domain containing protein |
|---|
| Protein accession | YP_003390037 |
|---|
| Protein GI | 284040107 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.477377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGAGA GAAAGGGGGA GAGGTTACTA AATCAGGTTC GTCTTCTTTG CATTCTCGCG
TATCTGGTAA CAGGCTTTTA CCCCGAAGCG GCTTATGCTA AATCAAACCA GTTACCAGCG
ACCGGGTATC CGGCGGAGGC AACAGCTACC GGTACGAAAA GCGTCACGGT AGTTGACAGG
AAAACACCGG TCATTAAAAC CAATGGCGAC AAAACGTTTA CGTACAAGGC TGGTAAGTGC
GGAGTTGTCT TCAAAGCATC GGCATTAGCA ATCGGAAACG GTTCTGTAAG AAAACCGAAA
GCGGTACGCA GCGATGGAAA ACCATTAAGT GCCGAGTATT TGGCCGGTGT CACAACCATT
GTCTGGAGCC TTATGGATGG CAATACTGTA TCCCCCGTTA CACAAACCAT AACCGTACTC
GATAGCGAAG CACCGGTTAT CAGTACCAAT GGTGATAAAG TGCTTCCAAA CGACGCTGGT
AAGCCGGGAG CCGTTGTCGA CCTGTTCGCG TTGGCCACGG ATAACTGCTC GGTTGGTCAG
CCCATTGGCG TACGTAGTGA TGGTAAACCC TTAGCGGCCG AGTATCCGGT GGGGACAACA
ACCGTTACCT GGCATGTCAG CGATATTAAT GGAAATGCAG CAGTCCCTGT TACACAAACC
GTTACTGTAA CCAACGCGAC ACCGGTTGTA AGCCTGATAA AAGCCCCCGG CGATCCGGTA
AAGATCGGCA ATGAAGCGAA CCTTACCGTT AATTTTACCG ATACCAATAG CGGTCAGGCT
GTGTGGTACT GGGGAGACGA AACATCGTCG GTCGGGGTCA TTGAGGGGTT CACCGTACGG
GGTACTCATC GGTATACCAA AGCCGGTGTT TACTCAGTCA CCTTTGTTCT GACGGATCTA
TGCGGTAAAT CAGCCCGTCA GGATCATCAT TATGTTGTCG TTTATGATGC CAGTACCGAC
TCCCGCTCCC TGACGTCGCT CGCTGGTGCA GAAGCGGCTG TAAAGGCGCC GGTGTCTACC
GACGCCTTCT TACTGCGCAA CTACCCTAAC CCGTTCGAGA CAAAGACGGC CATTGAGTTT
GTACTGCCAC AAGGCGGAGA GTACACACTG AACATTCTGG ACATGAAAGG TAGTGTGTTG
CGTTCGCTCC AGACCGGTAA AGCTCAGGCT GGTGCATTAA ACCGCGTAAC GTGGGAGGTT
AAAGAGTTTC CCAATGGCCT GTATATTGGT CAGTTAACCA CCTCTCAAGG TGTCAAGTCT
ATTGAACTAC TGGTAAAGTA A
|
|---|
| Protein sequence | MVERKGERLL NQVRLLCILA YLVTGFYPEA AYAKSNQLPA TGYPAEATAT GTKSVTVVDR
KTPVIKTNGD KTFTYKAGKC GVVFKASALA IGNGSVRKPK AVRSDGKPLS AEYLAGVTTI
VWSLMDGNTV SPVTQTITVL DSEAPVISTN GDKVLPNDAG KPGAVVDLFA LATDNCSVGQ
PIGVRSDGKP LAAEYPVGTT TVTWHVSDIN GNAAVPVTQT VTVTNATPVV SLIKAPGDPV
KIGNEANLTV NFTDTNSGQA VWYWGDETSS VGVIEGFTVR GTHRYTKAGV YSVTFVLTDL
CGKSARQDHH YVVVYDASTD SRSLTSLAGA EAAVKAPVST DAFLLRNYPN PFETKTAIEF
VLPQGGEYTL NILDMKGSVL RSLQTGKAQA GALNRVTWEV KEFPNGLYIG QLTTSQGVKS
IELLVK
|
|---|
| |